myRT

myRT report for GCA_011051405.1_ASM1105140v1

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Seq: DSKI01000020.1 TPA_asm: Agrobacterium albertimagni isolate SpSt-243 Ga0101941_1004358, whole genome shotgun sequence (4228 bp)
Overview 1 RT 1: 291-4033 bp Neighborhood of RT #1 [291, 4107] AraH PBP1_ABC_sugar_binding_like_4 RVT-GII GIIM Feature: gene Location: 291-1295 bp Feature: domain Description: AraH Location: 324-1254 bp Feature: domain Description: AraH Location: 324-1 254 bp Feature: gene Location: 1366-2334 bp Feature: domain Description: PBP1_ABC_sugar_binding_like_4 Location: 1450-2281 bp Feature: domain Description: PBP1 _ABC_sugar_binding_like_4 Location: 1 450-2281 bp Feature: gene Location: 2863-4107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3067-3727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3067-3727 bp Feature: domain Description: GIIM Note: maturase Location: 3808-4033 bp Feature: domain Description: GIIM Note: maturase Location: 3808-4033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP1_ABC_sugar_binding_like_4, RVT-GII, GIIM (pfam08388), AraH (COG1172)

Seq: DSKI01001025.1 TPA_asm: Agrobacterium albertimagni isolate SpSt-243 Ga0101941_1006840, whole genome shotgun sequence (2713 bp)
Overview 1 RT 1: 137-2690 bp Neighborhood of RT #1 [137, 2710] GIIM RVT-GII Tad VWA Feature: gene Location: 137-487 bp Feature: gene Location: 596-973 bp Feature: domain Description: GIIM Note: maturase Location: 701-968 bp Feature: domain Description: GIIM Note: maturase Location: 701-968 bp Feature: gene Location: 985-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 988-1318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 988-1318 bp Feature: gene Location: 1691-2710 bp Feature: domain Description: Tad Location: 1778-1910 bp Feature: domain Description: Tad Location: 1778-1910 bp Feature: domain Description: VWA Location: 2198-2690 bp Feature: domain Description: VWA Location: 2 198-2 690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tad (pfam13400), VWA (smart00327), GIIM (pfam08388), RVT-GII