myRT

myRT report for GCA_011052285.1_ASM1105228v1

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Seq: DRJH01000020.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-412 HyVt-412_k95_109231, whole genome shotgun sequence (13099 bp)
Overview 1 RT 1: 109-1902 bp Neighborhood of RT #1 [109, 1916] RVT-CRISPR-like DUF2797 Feature: gene Location: 109-333 bp Feature: gene Location: 409-594 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 427-580 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 427-580 bp Feature: gene Location: 870-1049 bp Feature: gene Location: 1101-1916 bp Feature: domain Description: DUF2797 Location: 1212-1902 bp Feature: domain Description: DUF2797 Location: 1 21 2-1 902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, DUF2797 (pfam10977)

Seq: DRJH01000334.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-412 HyVt-412_k95_56424, whole genome shotgun sequence (5241 bp)
Overview 1 RT 1: 2-2608 bp Neighborhood of RT #1 [2, 2610] DDE_Tnp_ISAZ013 RVT-GII KOG4605 pstB Feature: gene Location: 2-277 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 5-266 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 5-2 66 bp Feature: gene Location: 547-1146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661-844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661-844 bp Feature: gene Location: 1243-1569 bp Feature: domain Description: KOG4605 Location: 1327-1564 bp Feature: domain Description: KOG4605 Location: 132 7-1564 bp Feature: gene Location: 1780-2610 bp Feature: domain Description: pstB Location: 1858-2608 bp Feature: domain Description: pstB Location: 1858-2 608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISAZ013 (pfam07592), RVT-GII, KOG4605 (KOG4605, Uncharacterized conserved protein containing CDGSH-type Zn-finger ), pstB (PRK10744)

Seq: DRJH01000483.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-412 HyVt-412_k95_95792, whole genome shotgun sequence (2853 bp)
Overview 1 RT 1: 1-2831 bp Neighborhood of RT #1 [1, 2831] Metallophos_2 SLC5sbd RVT-GII Feature: gene Location: 1-576 bp Feature: domain Description: Metallophos_2 Location: 70-577 bp Feature: domain Description: Metallophos_2 Location: 70-577 bp Feature: gene Location: 602-1981 bp Feature: domain Description: SLC5sbd Location: 623-1856 bp Feature: domain Description: SLC5sbd Location: 623 -1856 bp Feature: gene Location: 2150-2632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2252-2474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2252-2474 bp Feature: gene Location: 2586-2831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Metallophos_2 (pfam12850), SLC5sbd (cd10322), RVT-GII