myRT

myRT report for GCA_011052885.1_ASM1105288v1

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Seq: DRIC01000001.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-384 HyVt-384_k145_10001, whole genome shotgun sequence (3776 bp)
Overview 1 RT 1: 1-2681 bp Neighborhood of RT #1 [1, 2681] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1-180 bp Feature: gene Location: 336-2027 bp Feature: domain Description: RVT_N Location: 390-630 bp Feature: domain Description: RVT_N Location: 390-630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 678-1323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 678-1 323 bp Feature: domain Description: GIIM Note: maturase Location: 1374-1608 bp Feature: domain Description: GIIM Note: maturase Location: 1 374-1 608 bp Feature: domain Description: HNHc Note: nucleases Location: 1827-1980 bp Feature: domain Description: HNHc Note: nucleases Location: 1 827-1 980 bp Feature: gene Location: 2140-2298 bp Feature: gene Location: 2466-2681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: DRIC01000036.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-384 HyVt-384_k145_11791, whole genome shotgun sequence (13419 bp)
Overview 1 RT 1: 5228-8939 bp Neighborhood of RT #1 [5228, 8939] RVT-DGRs Avd_like Feature: gene Location: 5228-5887 bp Feature: gene Location: 6154-6519 bp Feature: gene Location: 6565-7722 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6814-7498 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6814-7498 bp Feature: gene Location: 7935-8288 bp Feature: domain Description: Avd_like Location: 7962-8268 bp Feature: domain Description: Avd_like Location: 7962 -82 68 bp Feature: gene Location: 8346-8939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: DRIC01000220.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-384 HyVt-384_k145_5196, whole genome shotgun sequence (16051 bp)
Overview 1 RT 1: 7678-10848 bp Neighborhood of RT #1 [7678, 10848] xerC RVT-G2L4 Feature: gene Location: 7678-8733 bp Feature: domain Description: xerC Location: 7888-8680 bp Feature: domain Description: xerC Location: 7888-8680 bp Feature: gene Location: 8762-8968 bp Feature: gene Location: 9128-10381 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 9347-9932 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 93 47-993 2 bp Feature: gene Location: 10443-10637 bp Feature: gene Location: 10717-10848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), RVT-G2L4