myRT

myRT report for GCA_011059195.1_ASM1105919v1

Download annotations/find similar RTs

Seq: JAALJJ010000128.1 Klebsiella pneumoniae strain VBNK6 NODE_123_length_1365_cov_137.978_ID_245, whole genome shotgun sequence (1365 bp)
Overview 1 RT 1: 59-971 bp Neighborhood of RT #1 [59, 1363] RVT-GII Feature: gene Location: 59-1363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281-971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281 -971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAALJJ010000018.1 Klebsiella pneumoniae strain VBNK6 NODE_69_length_15663_cov_32.2153_ID_137, whole genome shotgun sequence (15663 bp)
Overview 1 RT 1: 489-7539 bp Neighborhood of RT #1 [489, 7556] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 489-1346 bp Feature: domain Description: PRK09692 Location: 513-1305 bp Feature: domain Description: PRK09692 Location: 513-1305 bp Feature: gene Location: 1612-2052 bp Feature: domain Description: Integrase_1 Location: 1618-1834 bp Feature: domain Description: Integrase_1 Location: 1618-1834 bp Feature: gene Location: 2109-4187 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2517-2961 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 517-2 961 bp Feature: gene Location: 4187-6796 bp Feature: domain Description: FimD Location: 4244-6785 bp Feature: domain Description: FimD Location: 42 44-6785 bp Feature: gene Location: 6828-7556 bp Feature: domain Description: FimC Location: 6876-7539 bp Feature: domain Description: FimC Location: 6876-7539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)