myRT

myRT report for GCA_011062845.1_ASM1106284v1

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Seq: JAALMM010000003.1 Clostridium perfringens strain CP-27, whole genome shotgun sequence (336303 bp)
Overview 1 RT 1: 113902-123363 bp Neighborhood of RT #1 [113902, 123395] LolD SalY SalY RVT-UG5 nitrilase Acetyltransf_10 Feature: gene Location: 113902-114603 bp Feature: domain Description: LolD Location: 113917-114553 bp Feature: domain Description: LolD Location: 1 1 391 7-1 1 4553 bp Feature: gene Location: 114686-118018 bp Feature: domain Description: SalY Location: 115034-116777 bp Feature: domain Description: SalY Location: 1 1 5034-1 1 6777 bp Feature: domain Description: SalY Location: 116843-118010 bp Feature: domain Description: SalY Location: 1 1 6843-1 1 801 0 bp Feature: gene Location: 118189-121938 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 118708-119254 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 1 8708-1 1 9254 bp Feature: domain Description: nitrilase Location: 121159-121843 bp Feature: domain Description: nitrilase Location: 1 21 1 59-1 21 843 bp Feature: gene Location: 121953-122870 bp Feature: gene Location: 122919-123395 bp Feature: domain Description: Acetyltransf_10 Location: 123087-123363 bp Feature: domain Description: Acetyltransf_1 0 Location: 1 23087-1 23363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), SalY (COG0577), RVT-UG5, nitrilase (cl11424), Acetyltransf_10 (pfam13673)

Seq: JAALMM010000034.1 Clostridium perfringens strain CP-27, whole genome shotgun sequence (2950 bp)
Overview 1 RT 1: 308-2949 bp Neighborhood of RT #1 [308, 2949] RVT-GII HNHc Feature: gene Location: 308-472 bp Feature: gene Location: 828-2783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1188-1935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1188-1935 bp Feature: domain Description: HNHc Note: nucleases Location: 2508-2646 bp Feature: domain Description: HNHc Note: nucleases Location: 2 508-2 646 bp Feature: gene Location: 2824-2949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)