myRT

myRT report for GCA_011063245.1_ASM1106324v1

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Seq: JAALNH010000011.1 Clostridium perfringens strain CP-06, whole genome shotgun sequence (126735 bp)
Overview 1 RT 1: 35171-47214 bp Neighborhood of RT #1 [35171, 47225] Bacterial_PFK dnaE RVT-GII HNHc dnaE RVT-GII HNHc dnaE Sig70_famx3 Feature: gene Location: 35171-36130 bp Feature: domain Description: Bacterial_PFK Location: 35177-36119 bp Feature: domain Description: Bacterial_PFK Location: 351 77-361 1 9 bp Feature: gene Location: 36858-38690 bp Feature: domain Description: dnaE Location: 36861-38679 bp Feature: domain Description: dnaE Location: 36861 -38679 bp Feature: gene Location: 38860-40728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39178-39883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391 78-39883 bp Feature: domain Description: HNHc Note: nucleases Location: 40486-40651 bp Feature: domain Description: HNHc Note: nucleases Location: 40486-40651 bp Feature: gene Location: 41453-41965 bp Feature: domain Description: dnaE Location: 41495-41948 bp Feature: domain Description: dnaE Location: 41 495-41 948 bp Feature: gene Location: 42040-43866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42355-43051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42355-43051 bp Feature: domain Description: HNHc Note: nucleases Location: 43621-43756 bp Feature: domain Description: HNHc Note: nucleases Location: 43621 -43756 bp Feature: gene Location: 44972-46231 bp Feature: domain Description: dnaE Location: 44993-46217 bp Feature: domain Description: dnaE Location: 44993-4621 7 bp Feature: gene Location: 46638-47225 bp Feature: domain Description: Sig70_famx3 Location: 46755-47214 bp Feature: domain Description: Sig70_famx3 Location: 46755-4721 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bacterial_PFK (cd00763), dnaE (PRK07374), RVT-GII, HNHc (smart00507), Sig70_famx3 (TIGR02954)

Seq: JAALNH010000005.1 Clostridium perfringens strain CP-06, whole genome shotgun sequence (171635 bp)
Overview 1 RT 1: 85651-90860 bp Neighborhood of RT #1 [85651, 90860] DUF3892 xerC RVT-GII HNHc xerC Feature: gene Location: 85651-85869 bp Feature: domain Description: DUF3892 Location: 85666-85864 bp Feature: domain Description: DUF3892 Location: 85666-85864 bp Feature: gene Location: 86371-87345 bp Feature: domain Description: xerC Location: 86743-87328 bp Feature: domain Description: xerC Location: 86743-8732 8 bp Feature: gene Location: 88051-89895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88375-89089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88375-89089 bp Feature: domain Description: HNHc Note: nucleases Location: 89650-89782 bp Feature: domain Description: HNHc Note: nucleases Location: 89650-89782 bp Feature: gene Location: 90048-90377 bp Feature: domain Description: xerC Location: 90072-90366 bp Feature: domain Description: xerC Location: 90072 -90366 bp Feature: gene Location: 90468-90860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3892 (pfam13031), xerC (PRK01287), RVT-GII, HNHc (smart00507)