myRT

myRT report for GCA_011065465.1_ASM1106546v1

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Seq: NXBL01000014.1 Klebsiella pneumoniae subsp. pneumoniae strain C1699 NODE_14, whole genome shotgun sequence (151779 bp)
Overview 1 RT 1: 32024-38877 bp Neighborhood of RT #1 [32024, 38894] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32024-32689 bp Feature: domain Description: INT_P4_C Location: 32129-32687 bp Feature: domain Description: INT_P4_C Location: 321 29-32687 bp Feature: gene Location: 32950-33390 bp Feature: domain Description: Integrase_1 Location: 32956-33172 bp Feature: domain Description: Integrase_1 Location: 32956-331 72 bp Feature: gene Location: 33447-35525 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33855-34299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33855-34299 bp Feature: gene Location: 35525-38134 bp Feature: domain Description: FimD Location: 35582-38123 bp Feature: domain Description: FimD Location: 35582-381 23 bp Feature: gene Location: 38166-38894 bp Feature: domain Description: FimC Location: 38214-38877 bp Feature: domain Description: FimC Location: 3821 4-38877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NXBL01000023.1 Klebsiella pneumoniae subsp. pneumoniae strain C1699 NODE_23, whole genome shotgun sequence (80820 bp)
Overview 1 RT 1: 69871-73165 bp Neighborhood of RT #1 [69871, 73179] RVT-GII PRK10276 Feature: gene Location: 69871-70086 bp Feature: gene Location: 70353-70583 bp Feature: gene Location: 70817-72352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71222-71960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712 2 2 -71960 bp Feature: gene Location: 72403-72636 bp Feature: gene Location: 72754-73179 bp Feature: domain Description: PRK10276 Location: 72757-73165 bp Feature: domain Description: PRK102 76 Location: 72 757-73165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NXBL01000027.1 Klebsiella pneumoniae subsp. pneumoniae strain C1699 NODE_27, whole genome shotgun sequence (51424 bp)
Overview 1 RT 1: 22703-25741 bp Neighborhood of RT #1 [22703, 25741] PRK09678 RVT-UG11 SmpB Feature: gene Location: 22703-22921 bp Feature: domain Description: PRK09678 Location: 22706-22904 bp Feature: domain Description: PRK09678 Location: 22706-22904 bp Feature: gene Location: 23168-23356 bp Feature: gene Location: 23325-24098 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 23460-23913 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 23 460-23 913 bp Feature: gene Location: 24714-25196 bp Feature: domain Description: SmpB Location: 24744-25188 bp Feature: domain Description: SmpB Location: 24744-25188 bp Feature: gene Location: 25328-25741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668)

Seq: NXBL01000032.1 Klebsiella pneumoniae subsp. pneumoniae strain C1699 NODE_32, whole genome shotgun sequence (37474 bp)
Overview 1 RT 1: 21973-26995 bp Neighborhood of RT #1 [21973, 27003] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 21973-22938 bp Feature: domain Description: ArdC Location: 22099-22933 bp Feature: domain Description: ArdC Location: 22099-22933 bp Feature: gene Location: 23070-23339 bp Feature: gene Location: 23408-24895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23813-24503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23813-24 503 bp Feature: gene Location: 25049-25732 bp Feature: domain Description: PRK10276 Location: 25352-25715 bp Feature: domain Description: PRK10276 Location: 25352-25715 bp Feature: gene Location: 25732-27003 bp Feature: domain Description: umuC Location: 25735-26995 bp Feature: domain Description: umuC Location: 25735-26995 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: NXBL01000054.1 Klebsiella pneumoniae subsp. pneumoniae strain C1699 NODE_54, whole genome shotgun sequence (3108 bp)
Overview 1 RT 1: 2-2628 bp Neighborhood of RT #1 [2, 2873] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 2-277 bp Feature: domain Description: InsE Location: 11-263 bp Feature: domain Description: InsE Location: 11-263 bp Feature: gene Location: 333-758 bp Feature: domain Description: PHA02517 Location: 357-693 bp Feature: domain Description: PHA025 17 Location: 35 7-693 bp Feature: gene Location: 1350-2873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1623-2355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1623-235 5 bp Feature: domain Description: GIIM Note: maturase Location: 2430-2628 bp Feature: domain Description: GIIM Note: maturase Location: 2430-2628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NXBL01000065.1 Klebsiella pneumoniae subsp. pneumoniae strain C1699 NODE_65, whole genome shotgun sequence (1384 bp)
Overview 1 RT 1: 3-1383 bp Neighborhood of RT #1 [3, 1382] RVT-Retrons Feature: gene Location: 3-749 bp Feature: gene Location: 864-1382 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1044-1383 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1044-1383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons