myRT

myRT report for GCA_011065755.1_ASM1106575v1

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Seq: JAAMMB010000151.1 Escherichia coli strain UTA20 UTA20_contig_152, whole genome shotgun sequence (2310 bp)
Overview 1 RT 1: 12-1955 bp Neighborhood of RT #1 [12, 2200] RVT-GII GIIM Feature: gene Location: 12-383 bp Feature: gene Location: 677-2200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950-1682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950-1 682 bp Feature: domain Description: GIIM Note: maturase Location: 1757-1955 bp Feature: domain Description: GIIM Note: maturase Location: 1 757-1 955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAMMB010000016.1 Escherichia coli strain UTA20 UTA20_contig_16, whole genome shotgun sequence (226291 bp)
Overview 1 RT 1: 101456-108243 bp Neighborhood of RT #1 [101456, 109133] Q RVT-Retrons RVT-AbiP2 Phage_GPA Feature: gene Location: 101456-102475 bp Feature: domain Description: Q Location: 101459-102470 bp Feature: domain Description: Q Location: 101459-102 470 bp Feature: gene Location: 102518-103225 bp Feature: gene Location: 103222-104412 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103372-103954 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103372 -103954 bp Feature: gene Location: 104963-106507 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 105380-105833 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 105380-105833 bp Feature: gene Location: 106673-106933 bp Feature: gene Location: 106995-109133 bp Feature: domain Description: Phage_GPA Location: 107256-108243 bp Feature: domain Description: Phage_GPA Location: 1072 56-1082 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840)

Seq: JAAMMB010000071.1 Escherichia coli strain UTA20 UTA20_contig_71, whole genome shotgun sequence (24894 bp)
Overview 1 RT 1: 2895-7741 bp Neighborhood of RT #1 [2895, 7741] DUF3987 Inovirus_Gp2 RVT-GII Feature: gene Location: 2895-4328 bp Feature: domain Description: DUF3987 Location: 2988-4065 bp Feature: domain Description: DUF3 987 Location: 2988-4065 bp Feature: gene Location: 5187-5750 bp Feature: domain Description: Inovirus_Gp2 Location: 5244-5685 bp Feature: domain Description: Inovirus_Gp2 Location: 5244-5685 bp Feature: gene Location: 6076-7239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6190-6877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6190-6877 bp Feature: gene Location: 7226-7534 bp Feature: gene Location: 7568-7741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII