myRT

myRT report for GCA_011065895.1_ASM1106589v1

Download annotations/find similar RTs

Seq: JAALCR010000010.1 Paludisphaera sp. JC665, whole genome shotgun sequence (307920 bp)
Overview 1 RT 1: 218723-223166 bp Neighborhood of RT #1 [218723, 223231] HTH_XRE RVT-Retrons Methyltransf_25 N_methyl SBP_bac_10 Feature: gene Location: 218723-219001 bp Feature: gene Location: 219669-219920 bp Feature: domain Description: HTH_XRE Location: 219672-219768 bp Feature: domain Description: HTH_XRE Location: 21 9672-21 9768 bp Feature: gene Location: 219922-220914 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 220057-220582 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 220057-220582 bp Feature: gene Location: 221127-221882 bp Feature: domain Description: Methyltransf_25 Location: 221313-221592 bp Feature: domain Description: Methyltransf_25 Location: 221 31 3-221 592 bp Feature: gene Location: 222152-223231 bp Feature: domain Description: N_methyl Location: 222158-222230 bp Feature: domain Description: N_methyl Location: 2221 58-222230 bp Feature: domain Description: SBP_bac_10 Location: 222242-223166 bp Feature: domain Description: SBP_bac_1 0 Location: 222242-2231 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, Methyltransf_25 (pfam13649), N_methyl (pfam07963), SBP_bac_10 (pfam07596)

Seq: JAALCR010000004.1 Paludisphaera sp. JC665, whole genome shotgun sequence (376795 bp)
Overview 1 RT 1: 283826-296797 bp Neighborhood of RT #1 [283826, 296847] WD40 WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 SWIM WGR_MMR_like RVT-Retrons POLIIIAc PRK11360 PAC BaeS Feature: gene Location: 283826-290173 bp Feature: domain Description: WD40 Location: 284171-284429 bp Feature: domain Description: WD40 Location: 2 84171-2 8442 9 bp Feature: domain Description: WD40 Location: 284486-284573 bp Feature: domain Description: WD40 Location: 2 84486-2 84573 bp Feature: domain Description: HEAT_2 Location: 284783-284927 bp Feature: domain Description: HEAT_2 Location: 2 84783-2 8492 7 bp Feature: domain Description: HEAT_2 Location: 284951-285209 bp Feature: domain Description: HEAT_2 Location: 2 84951-2 852 09 bp Feature: domain Description: HEAT_2 Location: 285242-285392 bp Feature: domain Description: HEAT_2 Location: 2 852 42 -2 85392 bp Feature: domain Description: HEAT_2 Location: 285581-285830 bp Feature: domain Description: HEAT_2 Location: 2 85581-2 85830 bp Feature: domain Description: HEAT_2 Location: 285869-286139 bp Feature: domain Description: HEAT_2 Location: 2 85869-2 86139 bp Feature: domain Description: HEAT_2 Location: 286265-286412 bp Feature: domain Description: HEAT_2 Location: 2 862 65-2 86412 bp Feature: domain Description: HEAT_2 Location: 286421-286547 bp Feature: domain Description: HEAT_2 Location: 2 8642 1-2 86547 bp Feature: domain Description: HEAT_2 Location: 286595-286793 bp Feature: domain Description: HEAT_2 Location: 2 86595-2 86793 bp Feature: domain Description: HEAT_2 Location: 286928-287099 bp Feature: domain Description: HEAT_2 Location: 2 8692 8-2 87099 bp Feature: domain Description: HEAT_2 Location: 287840-288056 bp Feature: domain Description: HEAT_2 Location: 2 87840-2 88056 bp Feature: domain Description: HEAT_2 Location: 288389-288566 bp Feature: domain Description: HEAT_2 Location: 2 88389-2 88566 bp Feature: domain Description: HEAT_2 Location: 288578-288830 bp Feature: domain Description: HEAT_2 Location: 2 88578-2 88830 bp Feature: domain Description: HEAT_2 Location: 288866-289100 bp Feature: domain Description: HEAT_2 Location: 2 88866-2 89100 bp Feature: gene Location: 290170-292047 bp Feature: domain Description: SWIM Location: 291640-291763 bp Feature: domain Description: SWIM Location: 2 91640-2 91763 bp Feature: domain Description: WGR_MMR_like Location: 291847-292027 bp Feature: domain Description: WGR_MMR_like Location: 2 91847-2 92 02 7 bp Feature: gene Location: 292056-293369 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 292512-293127 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 92 512 -2 9312 7 bp Feature: gene Location: 293373-294710 bp Feature: domain Description: POLIIIAc Location: 293499-293625 bp Feature: domain Description: POLIIIAc Location: 2 93499-2 9362 5 bp Feature: gene Location: 294808-296847 bp Feature: domain Description: PRK11360 Location: 295132-295288 bp Feature: domain Description: PRK11360 Location: 2 95132 -2 952 88 bp Feature: domain Description: PAC Location: 295354-295471 bp Feature: domain Description: PAC Location: 2 95354-2 95471 bp Feature: domain Description: BaeS Location: 295558-296797 bp Feature: domain Description: BaeS Location: 2 95558-2 96797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), HEAT_2 (pfam13646), SWIM (pfam04434), WGR_MMR_like (cd07996), RVT-Retrons, POLIIIAc (smart00481), PRK11360 (two-component system sensor histidine kinase AtoS), PAC (smart00086), BaeS (COG0642)

Seq: JAALCR010000051.1 Paludisphaera sp. JC665, whole genome shotgun sequence (31857 bp)
Overview 1 RT 1: 15321-24118 bp Neighborhood of RT #1 [15321, 24150] RVT-Retrons COG3975 AcrR Feature: gene Location: 15321-17270 bp Feature: gene Location: 17556-19250 bp Feature: gene Location: 19305-20975 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20127-20742 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20127-20742 bp Feature: gene Location: 21520-23931 bp Feature: domain Description: COG3975 Location: 22156-23929 bp Feature: domain Description: COG3 975 Location: 22156-23 929 bp Feature: gene Location: 22588-24150 bp Feature: domain Description: AcrR Location: 23569-24118 bp Feature: domain Description: AcrR Location: 23 569-24118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3975 (Predicted metalloprotease, contains C-terminal PDZ domain ), AcrR (COG1309)