myRT

myRT report for GCA_011065935.1_ASM1106593v1

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Seq: JAAMNH010000013.1 Clostridium estertheticum strain FP3 scaffold_12, whole genome shotgun sequence (153399 bp)
Overview 1 RT 1: 2-2778 bp Neighborhood of RT #1 [2, 2789] RVT-GII PRK00702 RimL Feature: gene Location: 2-505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257-506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257-506 bp Feature: gene Location: 1231-1929 bp Feature: domain Description: PRK00702 Location: 1240-1885 bp Feature: domain Description: PRK00702 Location: 1 240-1 885 bp Feature: gene Location: 2232-2789 bp Feature: domain Description: RimL Location: 2259-2778 bp Feature: domain Description: RimL Location: 2259-2778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00702 (ribose-5-phosphate isomerase RpiA), RimL (COG1670), RVT-GII

Seq: JAAMNH010000014.1 Clostridium estertheticum strain FP3 scaffold_13, whole genome shotgun sequence (126511 bp)
Overview 1 RT 1: 122315-126477 bp Neighborhood of RT #1 [122315, 126509] fmt RVT-GII YkfC GIIM Feature: gene Location: 122315-123268 bp Feature: domain Description: fmt Location: 122318-123263 bp Feature: domain Description: fmt Location: 12 2 318-12 32 63 bp Feature: gene Location: 123707-124585 bp Feature: gene Location: 125361-126509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125616-125700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 5616-12 5700 bp Feature: domain Description: YkfC Location: 125715-126168 bp Feature: domain Description: YkfC Location: 12 5715-12 6168 bp Feature: domain Description: GIIM Note: maturase Location: 126291-126477 bp Feature: domain Description: GIIM Note: maturase Location: 12 62 91-12 6477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fmt (TIGR00460), RVT-GII, YkfC (COG3344), GIIM (pfam08388)

Seq: JAAMNH010000031.1 Clostridium estertheticum strain FP3 scaffold_30, whole genome shotgun sequence (27263 bp)
Overview 1 RT 1: 3737-8780 bp Neighborhood of RT #1 [3737, 8815] DUF3784 COG3220 RVT_N RVT-GII GIIM HNH COG3981 DUF3784 Feature: gene Location: 3737-4081 bp Feature: domain Description: DUF3784 Location: 3752-4034 bp Feature: domain Description: DUF3 784 Location: 3 752-403 4 bp Feature: gene Location: 4343-5185 bp Feature: domain Description: COG3220 Location: 4499-5063 bp Feature: domain Description: COG3 220 Location: 4499-5063 bp Feature: gene Location: 5382-7202 bp Feature: RT Description: RVT_N Location: 5439-5682 bp Feature: RT Description: RVT_N Location: 543 9-5682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5739-6390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 573 9-63 90 bp Feature: domain Description: GIIM Note: maturase Location: 6453-6687 bp Feature: domain Description: GIIM Note: maturase Location: 6453 -6687 bp Feature: domain Description: HNH Note: nucleases Location: 6927-7044 bp Feature: domain Description: HNH Note: nucleases Location: 6927-7044 bp Feature: gene Location: 7803-8321 bp Feature: domain Description: COG3981 Location: 7812-8304 bp Feature: domain Description: COG3 981 Location: 7812-83 04 bp Feature: gene Location: 8498-8815 bp Feature: domain Description: DUF3784 Location: 8603-8780 bp Feature: domain Description: DUF3 784 Location: 8603 -8780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3784 (pfam12650), COG3220 (Uncharacterized conserved protein, UPF0276 family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3981 (Predicted acetyltransferase )

Seq: JAAMNH010000033.1 Clostridium estertheticum strain FP3 scaffold_32, whole genome shotgun sequence (19269 bp)
Overview 1 RT 1: 2-7906 bp Neighborhood of RT #1 [2, 7906] RVT-GII DUF2268 DUF2268 LbH_G1P_TT_C_like Phage_int_SAM_4 INT_IntI_C GIIM RVT-GII Feature: gene Location: 2-259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-260 bp Feature: gene Location: 913-1839 bp Feature: domain Description: DUF2268 Location: 1327-1393 bp Feature: domain Description: DUF2268 Location: 1327-1393 bp Feature: domain Description: DUF2268 Location: 1573-1822 bp Feature: domain Description: DUF2268 Location: 1573-1822 bp Feature: gene Location: 2144-2803 bp Feature: domain Description: LbH_G1P_TT_C_like Location: 2291-2741 bp Feature: domain Description: LbH_G1P_TT_C_like Location: 2291-274 1 bp Feature: gene Location: 4292-5140 bp Feature: domain Description: Phage_int_SAM_4 Location: 4304-4547 bp Feature: domain Description: Phage_int_SAM_4 Location: 4 304 -4 54 7 bp Feature: domain Description: INT_IntI_C Location: 4586-5075 bp Feature: domain Description: INT_IntI_C Location: 4 586-5075 bp Feature: gene Location: 5562-6350 bp Feature: domain Description: GIIM Note: maturase Location: 5589-5796 bp Feature: domain Description: GIIM Note: maturase Location: 5589-5796 bp Feature: gene Location: 6393-7118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6399-7083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6399-7083 bp Feature: gene Location: 7120-7296 bp Feature: gene Location: 7733-7906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LbH_G1P_TT_C_like (cd05636), RVT-GII, DUF2268 (pfam10026), Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), GIIM (pfam08388)

Seq: JAAMNH010000040.1 Clostridium estertheticum strain FP3 scaffold_39, whole genome shotgun sequence (10413 bp)
Overview 1 RT 1: 3-3539 bp Neighborhood of RT #1 [3, 3592] RVT-GII Adenyl_transf MhpC Feature: gene Location: 3-749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-660 bp Feature: gene Location: 1514-2368 bp Feature: domain Description: Adenyl_transf Location: 1553-2363 bp Feature: domain Description: Adenyl_transf Location: 15 5 3-2363 bp Feature: gene Location: 3032-3592 bp Feature: domain Description: MhpC Location: 3035-3539 bp Feature: domain Description: MhpC Location: 3035 -35 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Adenyl_transf (pfam04439), MhpC (COG0596), RVT-GII

Seq: JAAMNH010000043.1 Clostridium estertheticum strain FP3 scaffold_42, whole genome shotgun sequence (8668 bp)
Overview 1 RT 1: 6150-8355 bp Neighborhood of RT #1 [6150, 8355] RimL RVT-GII GIIM Feature: gene Location: 6150-6314 bp Feature: gene Location: 6334-6915 bp Feature: domain Description: RimL Location: 6382-6868 bp Feature: domain Description: RimL Location: 6 382-6 86 8 bp Feature: gene Location: 7065-8120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7074-7740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7074-7740 bp Feature: domain Description: GIIM Note: maturase Location: 7836-8025 bp Feature: domain Description: GIIM Note: maturase Location: 7836 -8025 bp Feature: gene Location: 8209-8355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), RVT-GII, GIIM (pfam08388)

Seq: JAAMNH010000044.1 Clostridium estertheticum strain FP3 scaffold_43, whole genome shotgun sequence (8216 bp)
Overview 1 RT 1: 314-2067 bp Neighborhood of RT #1 [314, 2067] RVT-GII RVT-GII Feature: gene Location: 314-676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 569-662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 569-662 bp Feature: gene Location: 697-1311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 703-1105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 03-1105 bp Feature: gene Location: 1332-1487 bp Feature: gene Location: 1789-2067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAMNH010000046.1 Clostridium estertheticum strain FP3 scaffold_45, whole genome shotgun sequence (6187 bp)
Overview 1 RT 1: 3561-6111 bp Neighborhood of RT #1 [3561, 6185] Methyltransf_11 RVT-GII Feature: gene Location: 3561-4514 bp Feature: domain Description: Methyltransf_11 Location: 3897-4164 bp Feature: domain Description: Methyltransf_11 Location: 38 97-4164 bp Feature: gene Location: 4654-4947 bp Feature: gene Location: 5670-6185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5673-6111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5673-6111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_11 (pfam08241), RVT-GII