myRT

myRT report for GCA_011068405.2_ASM1106840v2

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Seq: JACBFH010000001.1 Bradyrhizobium sp. 323S2 Bradyrhizobium_sp_323S2_Contig1, whole genome shotgun sequence (10427992 bp) Associated domains: AglD2 (COG0392), SEST_like (cd01823), RVT-GII, GIIM (pfam08388), Peptidases_S8_1 (cd07487), COG5267 (Uncharacterized conserved protein, DUF1800 family ), AmpC (COG1680), PDZ_CTP_protease (cd00988), Beta-lactamase (pfam00144), M56_BlaR1_MecR1_like (cd07341)
DUF3471 (pfam11954), AbiEii (pfam08843), thio_ybgC (TIGR02799), pilus_cpaD (TIGR02522), InsE (COG2963), TnpB_IS66 (pfam05717), COG3547 (Transposase ), PRK06215 (hypothetical protein; Provisional), VirB10 (COG2948), GsiA (COG1123)
HTH_20 (pfam12840), RVT-Retrons, YHI9 (COG0384), BH0617 (COG3424), DDE_Tnp_1_6 (pfam13751), DUF772 (pfam05598), IstB_IS21 (pfam01695), COG4584 (Transposase ), LodA_like (cl21638), Haem_oxygenas_2 (pfam14518)
FixC (COG0644), Y2_Tnp (pfam04986), Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), COG3436 (Transposase ), LptD (COG1452), HTH_Tnp_1 (pfam01527), DAP2 (COG1506), UgpE (COG0395), UgpA (COG1175)
autotrns_rpt (TIGR02601), CadC1 (COG3710), TolBN (COG5616), TPR (smart00028)

Seq: JACBFH010000003.1 Bradyrhizobium sp. 323S2 Bradyrhizobium_sp_323S2_Contig3, whole genome shotgun sequence (404942 bp) Associated domains: HTH_Tnp_1 (pfam01527), TnpB_IS66 (pfam05717), GIIM (pfam08388), RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), Cytochrom_C (pfam00034)
MmsB (COG2084), DDE_Tnp_1_4 (pfam13701), HTH_32 (pfam13565), Tra5 (COG2801), PleD (COG3706), ArdC (COG4227)

Seq: JACBFH010000004.1 Bradyrhizobium sp. 323S2 Bradyrhizobium_sp_323S2_Contig4, whole genome shotgun sequence (447919 bp) Associated domains: Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), COG4584 (Transposase ), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276), InsE (COG2963), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)
HTH_32 (pfam13565), DDE_3 (pfam13358), DDE_Tnp_IS66_C (pfam13817), PHA02517 (putative transposase OrfB; Reviewed), SunT (COG2274)

Seq: JACBFH010000005.1 Bradyrhizobium sp. 323S2 Bradyrhizobium_sp_323S2_Contig5, whole genome shotgun sequence (182079 bp) Associated domains: S1-P1_nuclease (pfam02265), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), IS285 (COG3328)