myRT

myRT report for GCA_011068425.1_ASM1106842v1

Download annotations/find similar RTs

Seq: JAALNI010000139.1 Clostridium perfringens strain CP-05, whole genome shotgun sequence (2756 bp)
Overview 1 RT 1: 143-1934 bp Neighborhood of RT #1 [143, 2011] RVT-GII HNHc Feature: gene Location: 143-2011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 -1 1 66 bp Feature: domain Description: HNHc Note: nucleases Location: 1769-1934 bp Feature: domain Description: HNHc Note: nucleases Location: 1 769-1 934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JAALNI010000028.1 Clostridium perfringens strain CP-05, whole genome shotgun sequence (34721 bp)
Overview 1 RT 1: 25724-30929 bp Neighborhood of RT #1 [25724, 30934] xerC RVT-GII HNHc xerC DUF3892 Feature: gene Location: 25724-26116 bp Feature: gene Location: 26207-26536 bp Feature: domain Description: xerC Location: 26231-26525 bp Feature: domain Description: xerC Location: 2 62 31-2 652 5 bp Feature: gene Location: 26689-28509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26989-27703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6989-2 7703 bp Feature: domain Description: HNHc Note: nucleases Location: 28264-28396 bp Feature: domain Description: HNHc Note: nucleases Location: 2 82 64-2 8396 bp Feature: gene Location: 29240-30214 bp Feature: domain Description: xerC Location: 29612-30197 bp Feature: domain Description: xerC Location: 2 9612 -30197 bp Feature: gene Location: 30716-30934 bp Feature: domain Description: DUF3892 Location: 30731-30929 bp Feature: domain Description: DUF3892 Location: 30731-3092 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), RVT-GII, HNHc (smart00507), DUF3892 (pfam13031)

Seq: JAALNI010000049.1 Clostridium perfringens strain CP-05, whole genome shotgun sequence (21191 bp)
Overview 1 RT 1: 1-5741 bp Neighborhood of RT #1 [1, 5752] dnaE RVT-GII HNHc dnaE Sig70_famx3 Feature: gene Location: 1-492 bp Feature: domain Description: dnaE Location: 43-493 bp Feature: domain Description: dnaE Location: 43 -493 bp Feature: gene Location: 567-2393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882-1578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882-1578 bp Feature: domain Description: HNHc Note: nucleases Location: 2148-2283 bp Feature: domain Description: HNHc Note: nucleases Location: 2148-2283 bp Feature: gene Location: 3499-4749 bp Feature: domain Description: dnaE Location: 3511-4735 bp Feature: domain Description: dnaE Location: 3 511-473 5 bp Feature: gene Location: 5165-5752 bp Feature: domain Description: Sig70_famx3 Location: 5282-5741 bp Feature: domain Description: Sig70_famx3 Location: 5282-5741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaE (PRK07374), Sig70_famx3 (TIGR02954), RVT-GII, HNHc (smart00507)