myRT

myRT report for GCA_011075315.1_ASM1107531v1

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Seq: JAAIKF010000079.1 Klebsiella pneumoniae strain S54 S54_S7_L001_R2_001_contig_79_consensus, whole genome shotgun sequence (10363 bp)
Overview 1 RT 1: 2824-7849 bp Neighborhood of RT #1 [2824, 7854] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 2824-4095 bp Feature: domain Description: umuC Location: 2827-4087 bp Feature: domain Description: umuC Location: 2827-4087 bp Feature: gene Location: 4095-4778 bp Feature: domain Description: PRK10276 Location: 4398-4761 bp Feature: domain Description: PRK1 0276 Location: 4398-4761 bp Feature: gene Location: 4932-6419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5337-6027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5337-6027 bp Feature: gene Location: 6488-6757 bp Feature: gene Location: 6889-7854 bp Feature: domain Description: ArdC Location: 7015-7849 bp Feature: domain Description: ArdC Location: 701 5-7849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: JAAIKF010000007.1 Klebsiella pneumoniae strain S54 S54_S7_L001_R2_001_contig_7_consensus, whole genome shotgun sequence (193338 bp)
Overview 1 RT 1: 89968-96420 bp Neighborhood of RT #1 [89968, 96420] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 89968-90219 bp Feature: gene Location: 90249-91085 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 90738-90909 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 90738-90909 bp Feature: gene Location: 91741-92841 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91924-92452 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9192 4-92 452 bp Feature: gene Location: 92956-95202 bp Feature: domain Description: AAA_15 Location: 92959-93967 bp Feature: domain Description: AAA_15 Location: 92 959-93967 bp Feature: gene Location: 96115-96420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)