myRT

myRT report for GCA_011077025.1_ASM1107702v1

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Seq: JAALAG010000019.1 Escherichia coli strain M-S51-X3 NODE_19_length_91480_cov_121.632, whole genome shotgun sequence (91480 bp)
Overview 1 RT 1: 56718-62726 bp Neighborhood of RT #1 [56718, 62743] proA PRK09692 RVT-UG7 Psu Feature: gene Location: 56718-57971 bp Feature: domain Description: proA Location: 56745-57936 bp Feature: domain Description: proA Location: 56745-57936 bp Feature: gene Location: 58326-59510 bp Feature: domain Description: PRK09692 Location: 58332-59487 bp Feature: domain Description: PRK09692 Location: 58332-59487 bp Feature: gene Location: 59503-61131 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 59911-60340 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 5991 1 -60340 bp Feature: gene Location: 61128-61868 bp Feature: gene Location: 62171-62743 bp Feature: domain Description: Psu Location: 62189-62726 bp Feature: domain Description: Psu Location: 621 89-62726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: JAALAG010000049.1 Escherichia coli strain M-S51-X3 NODE_49_length_23045_cov_105.135, whole genome shotgun sequence (23045 bp)
Overview 1 RT 1: 11414-15284 bp Neighborhood of RT #1 [11414, 15284] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 11414-11740 bp Feature: domain Description: InsE Location: 11417-11738 bp Feature: domain Description: InsE Location: 11417-11738 bp Feature: gene Location: 11740-12219 bp Feature: domain Description: PHA02517 Location: 11800-12154 bp Feature: domain Description: PHA02 517 Location: 11800-12 154 bp Feature: gene Location: 12988-14334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13084-13816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13084-13816 bp Feature: domain Description: GIIM Note: maturase Location: 13891-14089 bp Feature: domain Description: GIIM Note: maturase Location: 13891-14089 bp Feature: gene Location: 14499-14903 bp Feature: domain Description: PHA02517 Location: 14502-14892 bp Feature: domain Description: PHA02 517 Location: 14502 -14892 bp Feature: gene Location: 15078-15284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)