myRT

myRT report for GCA_011077605.1_ASM1107760v1

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Seq: JAALBI010000018.1 Escherichia coli strain M-S51 NODE_18_length_90869_cov_87.7613, whole genome shotgun sequence (90869 bp)
Overview 1 RT 1: 56734-62742 bp Neighborhood of RT #1 [56734, 62759] proA PRK09692 RVT-UG7 Psu Feature: gene Location: 56734-57987 bp Feature: domain Description: proA Location: 56761-57952 bp Feature: domain Description: proA Location: 56761 -57952 bp Feature: gene Location: 58342-59526 bp Feature: domain Description: PRK09692 Location: 58348-59503 bp Feature: domain Description: PRK09692 Location: 58348-59503 bp Feature: gene Location: 59519-61147 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 59927-60356 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 59927-60356 bp Feature: gene Location: 61144-61884 bp Feature: gene Location: 62187-62759 bp Feature: domain Description: Psu Location: 62205-62742 bp Feature: domain Description: Psu Location: 62205-62742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: JAALBI010000049.1 Escherichia coli strain M-S51 NODE_49_length_23206_cov_74.9158, whole genome shotgun sequence (23206 bp)
Overview 1 RT 1: 11414-15284 bp Neighborhood of RT #1 [11414, 15284] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 11414-11740 bp Feature: domain Description: InsE Location: 11417-11738 bp Feature: domain Description: InsE Location: 11417-11738 bp Feature: gene Location: 11740-12219 bp Feature: domain Description: PHA02517 Location: 11800-12154 bp Feature: domain Description: PHA02 517 Location: 11800-12 154 bp Feature: gene Location: 12988-14334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13084-13816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13084-13816 bp Feature: domain Description: GIIM Note: maturase Location: 13891-14089 bp Feature: domain Description: GIIM Note: maturase Location: 13891-14089 bp Feature: gene Location: 14499-14903 bp Feature: domain Description: PHA02517 Location: 14502-14892 bp Feature: domain Description: PHA02 517 Location: 14502 -14892 bp Feature: gene Location: 15078-15284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)