myRT

myRT report for GCA_011077815.1_ASM1107781v1

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Seq: JAALBQ010000001.1 Klebsiella pneumoniae strain M-T3 3_R1_paired_contig_1_Average_coverage_253.57, whole genome shotgun sequence (308109 bp)
Overview 1 RT 1: 268873-275309 bp Neighborhood of RT #1 [268873, 275309] FimD RVT-UG4 EAL Feature: gene Location: 268873-271482 bp Feature: domain Description: FimD Location: 268930-271471 bp Feature: domain Description: FimD Location: 268930-271 471 bp Feature: gene Location: 271575-271847 bp Feature: gene Location: 271479-273512 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 271890-272334 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 271 890-272334 bp Feature: gene Location: 274159-275013 bp Feature: domain Description: EAL Location: 274843-274996 bp Feature: domain Description: EAL Location: 274843-274996 bp Feature: gene Location: 275103-275309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimD (COG3188), RVT-UG4, EAL (smart00052)

Seq: JAALBQ010000006.1 Klebsiella pneumoniae strain M-T3 3_R1_paired_contig_6_Average_coverage_315.93, whole genome shotgun sequence (28888 bp)
Overview 1 RT 1: 13933-19286 bp Neighborhood of RT #1 [13933, 19423] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 13933-15204 bp Feature: domain Description: umuC Location: 13936-15196 bp Feature: domain Description: umuC Location: 13936-15196 bp Feature: gene Location: 15204-15635 bp Feature: domain Description: PRK10276 Location: 15255-15618 bp Feature: domain Description: PRK102 76 Location: 152 55-15618 bp Feature: gene Location: 16042-17529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16447-17137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16447-17137 bp Feature: gene Location: 17778-18749 bp Feature: domain Description: StbA Location: 17781-18726 bp Feature: domain Description: StbA Location: 17781-1872 6 bp Feature: gene Location: 18752-19423 bp Feature: domain Description: Plasmid_stab_B Location: 18767-18974 bp Feature: domain Description: Plasmid_stab_B Location: 18767-18974 bp Feature: domain Description: Plasmid_stab_B Location: 19079-19286 bp Feature: domain Description: Plasmid_stab_B Location: 19079-192 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)