myRT

myRT report for GCA_011083025.2_ASM1108302v2

Download annotations/find similar RTs

Seq: JABJWV010000001.1 Pseudenhygromyxa sp. WMMC2535 tig00000001, whole genome shotgun sequence (9528923 bp)
Overview 1 RT 1: 6759143-6772052 bp 2 RT 2: 7236860-7244216 bp 3 RT 3: 9124686-9131027 bp Neighborhood of RT #1 [6759143, 6772052] WD40 WD40 WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons PRK06753 Neighborhood of RT #2 [7236860, 7245505] HEAT HEAT HEAT HEAT_2 Aldo_ket_red HEAT_2 RVT-Retrons zf-ribbon_3 Neighborhood of RT #3 [9124686, 9131608] PRK08181 rve RVT-GII KOG2132 Feature: gene Location: 6759143-6765811 bp Feature: domain Description: WD40 Location: 6759158-6759527 bp Feature: domain Description: WD40 Location: 67591 58-6759527 bp Feature: domain Description: WD40 Location: 6759596-6759662 bp Feature: domain Description: WD40 Location: 6759596-6759662 bp Feature: domain Description: WD40 Location: 6759707-6759788 bp Feature: domain Description: WD40 Location: 6759707-6759788 bp Feature: domain Description: HEAT_2 Location: 6760181-6760319 bp Feature: domain Description: HEAT_2 Location: 67601 81 -676031 9 bp Feature: domain Description: HEAT_2 Location: 6760559-6760805 bp Feature: domain Description: HEAT_2 Location: 6760559-6760805 bp Feature: domain Description: HEAT_2 Location: 6760940-6761207 bp Feature: domain Description: HEAT_2 Location: 6760940-6761 207 bp Feature: domain Description: HEAT_2 Location: 6761378-6761624 bp Feature: domain Description: HEAT_2 Location: 6761 378-6761 624 bp Feature: domain Description: HEAT_2 Location: 6761711-6761843 bp Feature: domain Description: HEAT_2 Location: 6761 71 1 -6761 843 bp Feature: domain Description: HEAT_2 Location: 6761873-6762128 bp Feature: domain Description: HEAT_2 Location: 6761 873-67621 28 bp Feature: domain Description: HEAT_2 Location: 6762164-6762377 bp Feature: domain Description: HEAT_2 Location: 67621 64-6762377 bp Feature: domain Description: HEAT_2 Location: 6763058-6763298 bp Feature: domain Description: HEAT_2 Location: 6763058-6763298 bp Feature: domain Description: HEAT_2 Location: 6763373-6763604 bp Feature: domain Description: HEAT_2 Location: 6763373-6763604 bp Feature: domain Description: HEAT_2 Location: 6763778-6763988 bp Feature: domain Description: HEAT_2 Location: 6763778-6763988 bp Feature: domain Description: HEAT_2 Location: 6764030-6764264 bp Feature: domain Description: HEAT_2 Location: 6764030-6764264 bp Feature: domain Description: HEAT_2 Location: 6764318-6764597 bp Feature: domain Description: HEAT_2 Location: 676431 8-6764597 bp Feature: domain Description: HEAT_2 Location: 6764669-6764840 bp Feature: domain Description: HEAT_2 Location: 6764669-6764840 bp Feature: domain Description: HEAT_2 Location: 6765278-6765431 bp Feature: domain Description: HEAT_2 Location: 6765278-6765431 bp Feature: domain Description: HEAT_2 Location: 6765593-6765761 bp Feature: domain Description: HEAT_2 Location: 6765593-6765761 bp Feature: gene Location: 6765808-6767727 bp Feature: gene Location: 6767751-6769097 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6768222-6768870 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6768222-6768870 bp Feature: gene Location: 6769766-6771028 bp Feature: domain Description: PRK06753 Location: 6769784-6770894 bp Feature: domain Description: PRK06753 Location: 6769784-6770894 bp Feature: gene Location: 6771132-6772052 bp Feature: gene Location: 7236860-7239070 bp Feature: gene Location: 7239178-7242159 bp Feature: domain Description: HEAT Location: 7239247-7239550 bp Feature: domain Description: HEAT Location: 7239247-7239550 bp Feature: domain Description: HEAT Location: 7239574-7239667 bp Feature: domain Description: HEAT Location: 7239574-7239667 bp Feature: domain Description: HEAT Location: 7240159-7240408 bp Feature: domain Description: HEAT Location: 72401 59-7240408 bp Feature: domain Description: HEAT_2 Location: 7240525-7240741 bp Feature: domain Description: HEAT_2 Location: 7240525-7240741 bp Feature: domain Description: Aldo_ket_red Location: 7241464-7241998 bp Feature: domain Description: Aldo_ket_red Location: 7241 464-7241 998 bp Feature: gene Location: 7242449-7243870 bp Feature: domain Description: HEAT_2 Location: 7242605-7242782 bp Feature: domain Description: HEAT_2 Location: 7242605-7242782 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7243022-7243622 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7243022-7243622 bp Feature: gene Location: 7243952-7244086 bp Feature: gene Location: 7244144-7245505 bp Feature: domain Description: zf-ribbon_3 Location: 7244150-7244216 bp Feature: domain Description: zf-ribbon_3 Location: 72441 50-724421 6 bp Feature: gene Location: 9124686-9125444 bp Feature: domain Description: PRK08181 Location: 9124803-9125442 bp Feature: domain Description: PRK081 81 Location: 91 24803-91 25442 bp Feature: gene Location: 9125441-9126841 bp Feature: domain Description: rve Location: 9125744-9126125 bp Feature: domain Description: rve Location: 91 25744-91 261 25 bp Feature: gene Location: 9127022-9128029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9127514-9128027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 2751 4-91 28027 bp Feature: gene Location: 9128878-9130347 bp Feature: gene Location: 9130352-9131608 bp Feature: domain Description: KOG2132 Location: 9130709-9131027 bp Feature: domain Description: KOG21 32 Location: 91 30709-91 31 027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), HEAT_2 (pfam13646), RVT-Retrons, PRK06753 (hypothetical protein; Provisional), HEAT (sd00044), Aldo_ket_red (pfam00248), zf-ribbon_3 (pfam13248), PRK08181 (transposase; Validated), rve (pfam00665), RVT-GII
KOG2132 (KOG2132, Uncharacterized conserved protein, contains JmjC domain )