myRT

myRT report for GCA_011089965.1_ASM1108996v1

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Seq: JAANAU010000034.1 Magnetococcales bacterium isolate DH2_bin6 NODE_139_length_29715_cov_2.45536, whole genome shotgun sequence (29715 bp)
Overview 1 RT 1: 3718-11918 bp Neighborhood of RT #1 [3718, 11944] DDE_5 CADG CADG CADG Big_9 DUF1566 RVT-DGRs DUF1566 RVT-GII RVT-GII GIIM Transposase_31 Feature: gene Location: 3718-4971 bp Feature: domain Description: DDE_5 Location: 3727-4453 bp Feature: domain Description: DDE_5 Location: 3727-4453 bp Feature: gene Location: 5080-7092 bp Feature: domain Description: CADG Location: 5167-5449 bp Feature: domain Description: CADG Location: 51 67-5449 bp Feature: domain Description: CADG Location: 5506-5743 bp Feature: domain Description: CADG Location: 5506-5743 bp Feature: domain Description: CADG Location: 5761-6046 bp Feature: domain Description: CADG Location: 5761 -6046 bp Feature: domain Description: Big_9 Location: 6292-6547 bp Feature: domain Description: Big_9 Location: 6292-6547 bp Feature: domain Description: DUF1566 Location: 6706-7078 bp Feature: domain Description: DUF1 566 Location: 6706-7078 bp Feature: gene Location: 7260-8582 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7281-7968 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7281 -7968 bp Feature: gene Location: 8579-9184 bp Feature: domain Description: DUF1566 Location: 8810-9173 bp Feature: domain Description: DUF1 566 Location: 881 0-91 73 bp Feature: gene Location: 9416-9898 bp Feature: gene Location: 9996-10505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10269-10476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0269-1 0476 bp Feature: gene Location: 10471-11274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10477-10909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0477-1 0909 bp Feature: domain Description: GIIM Note: maturase Location: 10966-11185 bp Feature: domain Description: GIIM Note: maturase Location: 1 0966-1 1 1 85 bp Feature: gene Location: 11367-11504 bp Feature: gene Location: 11537-11944 bp Feature: domain Description: Transposase_31 Location: 11558-11918 bp Feature: domain Description: Transposase_31 Location: 1 1 558-1 1 91 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), CADG (smart00736), Big_9 (pfam17963), DUF1566 (pfam07603), RVT-DGRs, RVT-GII, GIIM (pfam08388), Transposase_31 (pfam04754)