myRT

myRT report for GCA_011090175.1_ASM1109017v1

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Seq: JAAKZL010000011.1 Vibrio aestuarianus strain 15/075_3T2 NODE_11_length_86340_cov_48.562943, whole genome shotgun sequence (86340 bp)
Overview 1 RT 1: 81623-85718 bp Neighborhood of RT #1 [81623, 85723] PRK10302 RVT-DGRs PHA00652 DUF3751 34 PHA00653 Feature: gene Location: 81623-82078 bp Feature: domain Description: PRK10302 Location: 81629-82052 bp Feature: domain Description: PRK1 0302 Location: 81 629-82052 bp Feature: gene Location: 82332-82565 bp Feature: gene Location: 82544-83542 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 82757-83348 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 82757-83348 bp Feature: gene Location: 83822-84184 bp Feature: domain Description: PHA00652 Location: 83834-84179 bp Feature: domain Description: PHA00652 Location: 83834-841 79 bp Feature: gene Location: 84203-85723 bp Feature: domain Description: DUF3751 Location: 84230-84620 bp Feature: domain Description: DUF3751 Location: 84230-84620 bp Feature: domain Description: 34 Location: 84641-84743 bp Feature: domain Description: 34 Location: 84641 -84743 bp Feature: domain Description: PHA00653 Location: 84773-85718 bp Feature: domain Description: PHA00653 Location: 84773-8571 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10302 (hypothetical protein; Provisional), RVT-DGRs, PHA00652 (hypothetical protein), DUF3751 (pfam12571), 34 (PHA02584), PHA00653 (mtd;major tropism determinant)

Seq: JAAKZL010000171.1 Vibrio aestuarianus strain 15/075_3T2 NODE_171_length_2143_cov_28.003472, whole genome shotgun sequence (2143 bp)
Overview 1 RT 1: 113-1266 bp Neighborhood of RT #1 [113, 1736] RVT-Retrons Feature: gene Location: 113-517 bp Feature: gene Location: 510-1736 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 684-1266 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 684-12 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JAAKZL010000193.1 Vibrio aestuarianus strain 15/075_3T2 NODE_193_length_1181_cov_51.378558, whole genome shotgun sequence (1181 bp)
Overview 1 RT 1: 193-1066 bp Neighborhood of RT #1 [193, 1089] Tra5 RVT_N RVT-GII Feature: gene Location: 193-495 bp Feature: domain Description: Tra5 Location: 202-475 bp Feature: domain Description: Tra5 Location: 202-475 bp Feature: gene Location: 604-1089 bp Feature: RT Description: RVT_N Location: 652-895 bp Feature: RT Description: RVT_N Location: 652-895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 940-1066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 940-1066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT_N (pfam13655), RVT-GII

Seq: JAAKZL010000087.1 Vibrio aestuarianus strain 15/075_3T2 NODE_87_length_12996_cov_66.891988, whole genome shotgun sequence (12996 bp)
Overview 1 RT 1: 6157-12482 bp Neighborhood of RT #1 [6157, 12482] groES groEL RVT_N RVT-GII GIIM HNHc Feature: gene Location: 6157-6447 bp Feature: domain Description: groES Location: 6160-6445 bp Feature: domain Description: groES Location: 6160-64 4 5 bp Feature: gene Location: 6523-8151 bp Feature: domain Description: groEL Location: 6529-8146 bp Feature: domain Description: groEL Location: 6529-814 6 bp Feature: gene Location: 9247-10944 bp Feature: RT Description: RVT_N Location: 9319-9562 bp Feature: RT Description: RVT_N Location: 9319-9562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9607-10252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9607-10252 bp Feature: domain Description: GIIM Note: maturase Location: 10303-10537 bp Feature: domain Description: GIIM Note: maturase Location: 10303-10537 bp Feature: domain Description: HNHc Note: nucleases Location: 10753-10915 bp Feature: domain Description: HNHc Note: nucleases Location: 10753-10915 bp Feature: gene Location: 11223-11486 bp Feature: gene Location: 11925-12482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)