myRT

myRT report for GCA_011090265.1_ASM1109026v1

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Seq: JAAKZM010000010.1 Vibrio aestuarianus strain 15/064_3T2 NODE_10_length_68875_cov_49.615538, whole genome shotgun sequence (68875 bp)
Overview 1 RT 1: 63053-66422 bp Neighborhood of RT #1 [63053, 66469] RVT-Retrons DDE_Tnp_IS66_C COG3950 Feature: gene Location: 63053-63187 bp Feature: gene Location: 63173-64150 bp Feature: gene Location: 64140-64391 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 64239-64386 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 64239-64386 bp Feature: gene Location: 64434-64718 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 64587-64701 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 64587-64701 bp Feature: gene Location: 64853-66469 bp Feature: domain Description: COG3950 Location: 65027-66422 bp Feature: domain Description: COG3950 Location: 65027-66422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DDE_Tnp_IS66_C (pfam13817), COG3950 (Predicted ATP-binding protein involved in virulence )

Seq: JAAKZM010000156.1 Vibrio aestuarianus strain 15/064_3T2 NODE_156_length_3867_cov_20.416845, whole genome shotgun sequence (3867 bp)
Overview 1 RT 1: 63-3676 bp Neighborhood of RT #1 [63, 3750] RVT-UG5 nitrilase Feature: gene Location: 63-332 bp Feature: gene Location: 389-865 bp Feature: gene Location: 898-3750 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1306-1777 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1306-1777 bp Feature: domain Description: nitrilase Location: 3091-3676 bp Feature: domain Description: nitrilase Location: 3091-3676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424)

Seq: JAAKZM010000188.1 Vibrio aestuarianus strain 15/064_3T2 NODE_188_length_2159_cov_111.919291, whole genome shotgun sequence (2159 bp)
Overview 1 RT 1: 111-1961 bp Neighborhood of RT #1 [111, 1961] RVT_N RVT-GII GIIM Feature: gene Location: 111-1742 bp Feature: domain Description: RVT_N Location: 318-561 bp Feature: domain Description: RVT_N Location: 3 18-561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 606-1233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 606-123 3 bp Feature: domain Description: GIIM Note: maturase Location: 1293-1518 bp Feature: domain Description: GIIM Note: maturase Location: 1293 -1518 bp Feature: gene Location: 1818-1961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAAKZM010000195.1 Vibrio aestuarianus strain 15/064_3T2 NODE_195_length_1961_cov_57.601418, whole genome shotgun sequence (1961 bp)
Overview 1 RT 1: 193-1614 bp Neighborhood of RT #1 [193, 1670] RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 193-1146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202-637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202-637 bp Feature: domain Description: GIIM Note: maturase Location: 697-922 bp Feature: domain Description: GIIM Note: maturase Location: 697-922 bp Feature: gene Location: 1170-1670 bp Feature: domain Description: RVT_N Location: 1224-1467 bp Feature: domain Description: RVT_N Location: 1224 -14 67 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1512-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1512-1614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)

Seq: JAAKZM010000204.1 Vibrio aestuarianus strain 15/064_3T2 NODE_204_length_1719_cov_122.648241, whole genome shotgun sequence (1719 bp)
Overview 1 RT 1: 73-1718 bp Neighborhood of RT #1 [73, 1718] RVT_N RVT-GII GIIM Feature: gene Location: 73-1545 bp Feature: domain Description: RVT_N Location: 121-361 bp Feature: domain Description: RVT_N Location: 121-361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1036 bp Feature: domain Description: GIIM Note: maturase Location: 1093-1321 bp Feature: domain Description: GIIM Note: maturase Location: 1093-1321 bp Feature: gene Location: 1587-1718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)