myRT

myRT report for GCA_011090365.1_ASM1109036v1

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Seq: PHGB01000106.1 Nitrospira sp. WS110 E_2_scaffold_14149, whole genome shotgun sequence (15015 bp)
Overview 1 RT 1: 2274-6475 bp Neighborhood of RT #1 [2274, 6475] UDG_fam4 group_II_RT_mat RVT-UG13 Feature: gene Location: 2274-2891 bp Feature: gene Location: 2988-3647 bp Feature: domain Description: UDG_fam4 Location: 3036-3537 bp Feature: domain Description: UDG_fam4 Location: 3036-3537 bp Feature: gene Location: 4014-5807 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4092-4302 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4092-4302 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 4389-4860 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 4389-4860 bp Feature: gene Location: 5931-6095 bp Feature: gene Location: 6191-6475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UDG_fam4 (TIGR00758), group_II_RT_mat (TIGR04416), RVT-UG13

Seq: PHGB01000027.1 Nitrospira sp. WS110 E_2_scaffold_4826, whole genome shotgun sequence (30799 bp)
Overview 1 RT 1: 14806-18570 bp Neighborhood of RT #1 [14806, 18779] RVT-GII Toluene_X Feature: gene Location: 14806-15051 bp Feature: gene Location: 15097-15429 bp Feature: gene Location: 15426-16907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15843-16533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15843-16533 bp Feature: gene Location: 17008-17214 bp Feature: gene Location: 17403-18779 bp Feature: domain Description: Toluene_X Location: 17526-18570 bp Feature: domain Description: Toluene_X Location: 1752 6-18570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Toluene_X (pfam03349)

Seq: PHGB01000050.1 Nitrospira sp. WS110 E_2_scaffold_7742, whole genome shotgun sequence (24058 bp)
Overview 1 RT 1: 19574-23706 bp Neighborhood of RT #1 [19574, 23978] TPR_2 TPR_2 PHA02517 RVT-GII GIIM HTH_21 Feature: gene Location: 19574-20719 bp Feature: domain Description: TPR_2 Location: 20360-20456 bp Feature: domain Description: TPR_2 Location: 203 60-20456 bp Feature: domain Description: TPR_2 Location: 20462-20561 bp Feature: domain Description: TPR_2 Location: 20462-20561 bp Feature: gene Location: 20842-21462 bp Feature: domain Description: PHA02517 Location: 20923-21361 bp Feature: domain Description: PHA02517 Location: 20923 -213 61 bp Feature: gene Location: 21455-23122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21905-22667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21905-22667 bp Feature: domain Description: GIIM Note: maturase Location: 22739-23009 bp Feature: domain Description: GIIM Note: maturase Location: 2273 9-23 009 bp Feature: gene Location: 23421-23978 bp Feature: domain Description: HTH_21 Location: 23565-23706 bp Feature: domain Description: HTH_21 Location: 23 565-23 706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR_2 (pfam07719), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276)