myRT

myRT report for GCA_011090435.1_ASM1109043v1

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Seq: SOZK01000002.1 Wolbachia pipientis isolate wCer2_DsimRC50, whole genome shotgun sequence (249032 bp)
Overview 1 RT 1: 108972-113427 bp 2 RT 2: 232121-235648 bp Neighborhood of RT #1 [108972, 113624] ftsW T_den_put_tspse RVT_N RVT-GII GIIM PDDEXK_2 Neighborhood of RT #2 [232121, 235648] PDDEXK_2 RVT_N RVT-GII GIIM T_den_put_tspse Feature: gene Location: 108972-110087 bp Feature: domain Description: ftsW Location: 109005-110031 bp Feature: domain Description: ftsW Location: 1 09005-1 1 0031 bp Feature: gene Location: 110458-111198 bp Feature: domain Description: T_den_put_tspse Location: 110584-111190 bp Feature: domain Description: T_den_put_tspse Location: 1 1 0584-1 1 1 1 90 bp Feature: gene Location: 111195-112601 bp Feature: domain Description: RVT_N Location: 111198-111342 bp Feature: domain Description: RVT_N Location: 1 1 1 1 98-1 1 1 342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111393-112044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 393-1 1 2044 bp Feature: domain Description: GIIM Note: maturase Location: 112095-112329 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 2095-1 1 2329 bp Feature: gene Location: 112781-112924 bp Feature: gene Location: 113181-113624 bp Feature: domain Description: PDDEXK_2 Location: 113208-113427 bp Feature: domain Description: PDDEXK_2 Location: 1 1 3208-1 1 3427 bp Feature: gene Location: 232121-232564 bp Feature: domain Description: PDDEXK_2 Location: 232148-232367 bp Feature: domain Description: PDDEXK_2 Location: 2321 48-232367 bp Feature: gene Location: 232670-232963 bp Feature: gene Location: 233001-234548 bp Feature: domain Description: RVT_N Location: 233052-233289 bp Feature: domain Description: RVT_N Location: 233052-233289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 233340-233991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 233340-233991 bp Feature: domain Description: GIIM Note: maturase Location: 234042-234276 bp Feature: domain Description: GIIM Note: maturase Location: 234042-234276 bp Feature: gene Location: 235106-235342 bp Feature: domain Description: T_den_put_tspse Location: 235121-235325 bp Feature: domain Description: T_den_put_tspse Location: 2351 21 -235325 bp Feature: gene Location: 235457-235648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ftsW (TIGR02614), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PDDEXK_2 (pfam12784)

Seq: SOZK01000003.1 Wolbachia pipientis isolate wCer2_DsimRC50, whole genome shotgun sequence (83202 bp)
Overview 1 RT 1: 33977-38746 bp Neighborhood of RT #1 [33977, 38746] PDDEXK_2 RVT_N RVT-GII GIIM T_den_put_tspse Feature: gene Location: 33977-34420 bp Feature: domain Description: PDDEXK_2 Location: 34004-34223 bp Feature: domain Description: PDDEXK_2 Location: 34004-342 2 3 bp Feature: gene Location: 34526-34819 bp Feature: gene Location: 34857-36404 bp Feature: domain Description: RVT_N Location: 34908-35145 bp Feature: domain Description: RVT_N Location: 34908-35145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35196-35847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35196-35847 bp Feature: domain Description: GIIM Note: maturase Location: 35898-36132 bp Feature: domain Description: GIIM Note: maturase Location: 35898-36132 bp Feature: gene Location: 36456-37187 bp Feature: domain Description: T_den_put_tspse Location: 36528-37170 bp Feature: domain Description: T_den_put_tspse Location: 3652 8-37170 bp Feature: gene Location: 37304-38746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), T_den_put_tspse (TIGR01784)

Seq: SOZK01000004.1 Wolbachia pipientis isolate wCer2_DsimRC50, whole genome shotgun sequence (329073 bp)
Overview 1 RT 1: 30192-36100 bp 2 RT 2: 141591-146180 bp 3 RT 3: 148464-153032 bp Neighborhood of RT #1 [30192, 36456] Virulence_RhuM RVT-GII PRK07078 repA Neighborhood of RT #2 [141591, 146180] DDE_Tnp_1 RVT-GII Intron_maturas2 HNHc DDE_Tnp_1 Neighborhood of RT #3 [148464, 153079] PDDEXK_2 RVT_N RVT-GII GIIM T_den_put_tspse PMM_PGM Feature: gene Location: 30192-31196 bp Feature: domain Description: Virulence_RhuM Location: 30381-31131 bp Feature: domain Description: Virulence_RhuM Location: 3 03 81-3 113 1 bp Feature: gene Location: 31408-31611 bp Feature: gene Location: 31782-33095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32037-32727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 203 7-3 2727 bp Feature: gene Location: 33008-33280 bp Feature: gene Location: 34261-36456 bp Feature: domain Description: PRK07078 Location: 34324-35242 bp Feature: domain Description: PRK07078 Location: 3 43 24-3 5242 bp Feature: domain Description: repA Location: 35341-36100 bp Feature: domain Description: repA Location: 3 53 41-3 6100 bp Feature: gene Location: 141591-142181 bp Feature: gene Location: 142190-142933 bp Feature: domain Description: DDE_Tnp_1 Location: 142196-142691 bp Feature: domain Description: DDE_Tnp_1 Location: 142196-142691 bp Feature: gene Location: 143549-145342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143816-144605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 816-144605 bp Feature: domain Description: Intron_maturas2 Location: 144698-144959 bp Feature: domain Description: Intron_maturas2 Location: 144698-144959 bp Feature: domain Description: HNHc Note: nucleases Location: 145115-145295 bp Feature: domain Description: HNHc Note: nucleases Location: 145115-145295 bp Feature: gene Location: 145559-145999 bp Feature: domain Description: DDE_Tnp_1 Location: 145568-145757 bp Feature: domain Description: DDE_Tnp_1 Location: 145568-145757 bp Feature: gene Location: 146013-146180 bp Feature: gene Location: 148464-148907 bp Feature: domain Description: PDDEXK_2 Location: 148491-148710 bp Feature: domain Description: PDDEXK_2 Location: 148491-148710 bp Feature: gene Location: 149164-149307 bp Feature: gene Location: 149345-150892 bp Feature: domain Description: RVT_N Location: 149396-149633 bp Feature: domain Description: RVT_N Location: 1493 96-14963 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149684-150335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149684-1503 3 5 bp Feature: domain Description: GIIM Note: maturase Location: 150386-150620 bp Feature: domain Description: GIIM Note: maturase Location: 1503 86-150620 bp Feature: gene Location: 151186-151617 bp Feature: domain Description: T_den_put_tspse Location: 151234-151609 bp Feature: domain Description: T_den_put_tspse Location: 15123 4-151609 bp Feature: gene Location: 151724-153079 bp Feature: domain Description: PMM_PGM Location: 151739-153032 bp Feature: domain Description: PMM_PGM Location: 15173 9-153 03 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Virulence_RhuM (pfam13310), RVT-GII, PRK07078 (hypothetical protein; Validated), repA, DDE_Tnp_1 (pfam01609), Intron_maturas2 (pfam01348), HNHc (smart00507), PDDEXK_2 (pfam12784), RVT_N (pfam13655), GIIM (pfam08388)
T_den_put_tspse (TIGR01784), PMM_PGM (cd03089)

Seq: SOZK01000006.1 Wolbachia pipientis isolate wCer2_DsimRC50, whole genome shotgun sequence (78712 bp)
Overview 1 RT 1: 26023-29407 bp Neighborhood of RT #1 [26023, 29407] pcrA RVT-GII Feature: gene Location: 26023-26451 bp Feature: gene Location: 26579-28495 bp Feature: domain Description: pcrA Location: 26591-28475 bp Feature: domain Description: pcrA Location: 26591-284 75 bp Feature: gene Location: 28719-28862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28722-28857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28722-28857 bp Feature: gene Location: 29025-29246 bp Feature: gene Location: 29279-29407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pcrA (TIGR01073), RVT-GII

Seq: SOZK01000009.1 Wolbachia pipientis isolate wCer2_DsimRC50, whole genome shotgun sequence (117548 bp)
Overview 1 RT 1: 1-2698 bp Neighborhood of RT #1 [1, 2895] PDDEXK_2 RVT_N RVT-GII GIIM PDDEXK_2 Feature: gene Location: 1-471 bp Feature: domain Description: PDDEXK_2 Location: 127-454 bp Feature: domain Description: PDDEXK_2 Location: 127-45 4 bp Feature: gene Location: 468-2015 bp Feature: domain Description: RVT_N Location: 519-756 bp Feature: domain Description: RVT_N Location: 5 19-75 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807-1458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807-145 8 bp Feature: domain Description: GIIM Note: maturase Location: 1509-1743 bp Feature: domain Description: GIIM Note: maturase Location: 15 09-1743 bp Feature: gene Location: 2053-2313 bp Feature: gene Location: 2452-2895 bp Feature: domain Description: PDDEXK_2 Location: 2479-2698 bp Feature: domain Description: PDDEXK_2 Location: 2479-2698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: SOZK01000001.1 Wolbachia pipientis isolate wCer2_DsimRC50 wCer2_11scaf_140219_final_RC50, whole genome shotgun sequence (303023 bp)
Overview 1 RT 1: 106567-111068 bp Neighborhood of RT #1 [106567, 111073] T_den_put_tspse RVT-GII GIIM HNHc RVT_N RVT-GII PDDEXK_2 Dimer_Tnp_Tn5 Feature: gene Location: 106567-107514 bp Feature: gene Location: 107729-108139 bp Feature: domain Description: T_den_put_tspse Location: 107834-108119 bp Feature: domain Description: T_den_put_tspse Location: 107834-108119 bp Feature: gene Location: 108136-109038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108157-108376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108157-108376 bp Feature: domain Description: GIIM Note: maturase Location: 108469-108685 bp Feature: domain Description: GIIM Note: maturase Location: 10846 9-1086 85 bp Feature: domain Description: HNHc Note: nucleases Location: 108883-109024 bp Feature: domain Description: HNHc Note: nucleases Location: 108883-109024 bp Feature: gene Location: 109107-109823 bp Feature: domain Description: RVT_N Location: 109158-109404 bp Feature: domain Description: RVT_N Location: 109158-109404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109446-109758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109446 -109758 bp Feature: gene Location: 110304-110711 bp Feature: domain Description: PDDEXK_2 Location: 110382-110697 bp Feature: domain Description: PDDEXK_2 Location: 110382-1106 97 bp Feature: gene Location: 110819-111073 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 110912-111068 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 110912-11106 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), PDDEXK_2 (pfam12784), Dimer_Tnp_Tn5 (pfam02281)