myRT

myRT report for GCA_011290325.1_ASM1129032v1

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Seq: WOTI01000164.1 Pseudomonas sp. AU8050 NODE_21012114+_length_303628_cov_164.301, whole genome shotgun sequence (303628 bp)
Overview 1 RT 1: 104146-113693 bp Neighborhood of RT #1 [104146, 113693] RVT-Retrons Feature: gene Location: 104146-105378 bp Feature: gene Location: 105814-107163 bp Feature: gene Location: 107324-108490 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 107579-108197 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 07579-1 081 97 bp Feature: gene Location: 108788-112714 bp Feature: gene Location: 113484-113693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: WOTI01000177.1 Pseudomonas sp. AU8050 NODE_21012164+_length_118454_cov_258.008, whole genome shotgun sequence (118454 bp)
Overview 1 RT 1: 58621-63872 bp Neighborhood of RT #1 [58621, 63892] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C ACR3 Feature: gene Location: 58621-58956 bp Feature: domain Description: TnpB_IS66 Location: 58639-58927 bp Feature: domain Description: TnpB_IS66 Location: 58639-5892 7 bp Feature: gene Location: 59018-60346 bp Feature: domain Description: LZ_Tnp_IS66 Location: 59150-59357 bp Feature: domain Description: LZ_Tnp_IS66 Location: 59150-59357 bp Feature: domain Description: zf-IS66 Location: 59396-59510 bp Feature: domain Description: zf-IS66 Location: 59396-59510 bp Feature: domain Description: DDE_Tnp_IS66 Location: 59552-60326 bp Feature: domain Description: DDE_Tnp_IS66 Location: 59552 -6032 6 bp Feature: gene Location: 60904-62565 bp Feature: RT Description: RVT_N Location: 60949-61192 bp Feature: RT Description: RVT_N Location: 60949-61192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61237-61873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 612 37-61873 bp Feature: domain Description: GIIM Note: maturase Location: 61930-62158 bp Feature: domain Description: GIIM Note: maturase Location: 61930-62 158 bp Feature: gene Location: 62757-62891 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 62763-62874 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 62 763-62 874 bp Feature: gene Location: 62930-63892 bp Feature: domain Description: ACR3 Location: 62945-63872 bp Feature: domain Description: ACR3 Location: 62 945-63872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), ACR3 (COG0798)