myRT

myRT report for GCA_011290685.1_ASM1129068v1

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Seq: JAANYN010000001.1 Cyclobacterium sp. GBPx2 NODE_1_length_1009915_cov_93.023981, whole genome shotgun sequence (1009915 bp)
Overview 1 RT 1: 930353-939728 bp Neighborhood of RT #1 [930353, 939728] YgiN RVT-GII GIIM UvrD UvrD DarT RVT-GII GIIM Cyclase Feature: gene Location: 930353-930646 bp Feature: domain Description: YgiN Location: 930362-930635 bp Feature: domain Description: YgiN Location: 930362-930635 bp Feature: gene Location: 931177-931329 bp Feature: gene Location: 931440-932660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931653-932301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931 653-932301 bp Feature: domain Description: GIIM Note: maturase Location: 932388-932559 bp Feature: domain Description: GIIM Note: maturase Location: 932388-932559 bp Feature: gene Location: 932894-934402 bp Feature: domain Description: UvrD Location: 932915-934091 bp Feature: domain Description: UvrD Location: 93291 5-934091 bp Feature: domain Description: UvrD Location: 934094-934358 bp Feature: domain Description: UvrD Location: 934094-934358 bp Feature: gene Location: 934405-935067 bp Feature: domain Description: DarT Location: 934477-935023 bp Feature: domain Description: DarT Location: 934477-935023 bp Feature: gene Location: 936598-936852 bp Feature: gene Location: 937144-937296 bp Feature: gene Location: 937407-938627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 937620-938268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 937620-938268 bp Feature: domain Description: GIIM Note: maturase Location: 938355-938526 bp Feature: domain Description: GIIM Note: maturase Location: 938355-938526 bp Feature: gene Location: 938765-939319 bp Feature: domain Description: Cyclase Location: 938777-939137 bp Feature: domain Description: Cyclase Location: 938777-9391 37 bp Feature: gene Location: 939573-939728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YgiN (COG1359), RVT-GII, GIIM (pfam08388), UvrD (COG0210), DarT, Cyclase (pfam04199)

Seq: JAANYN010000021.1 Cyclobacterium sp. GBPx2 NODE_21_length_28001_cov_92.759418, whole genome shotgun sequence (28001 bp)
Overview 1 RT 1: 23961-27050 bp Neighborhood of RT #1 [23961, 27050] RVT-GII Feature: gene Location: 23961-24125 bp Feature: gene Location: 24250-24948 bp Feature: gene Location: 25629-25775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25635-25761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5635-2 5761 bp Feature: gene Location: 26099-26269 bp Feature: gene Location: 26322-27050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAANYN010000004.1 Cyclobacterium sp. GBPx2 NODE_4_length_547880_cov_90.888537, whole genome shotgun sequence (547880 bp)
Overview 1 RT 1: 107563-112846 bp Neighborhood of RT #1 [107563, 113082] SusD SusD RVT-CRISPR-like PhoD MPP_PhoD Feature: gene Location: 107563-109254 bp Feature: domain Description: SusD Location: 107728-108370 bp Feature: domain Description: SusD Location: 107728-1083 70 bp Feature: domain Description: SusD Location: 108811-109252 bp Feature: domain Description: SusD Location: 108811-109252 bp Feature: gene Location: 109330-109476 bp Feature: gene Location: 109505-109675 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 109517-109664 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 109517-109664 bp Feature: gene Location: 109939-111396 bp Feature: domain Description: PhoD Location: 109951-111055 bp Feature: domain Description: PhoD Location: 109951-111055 bp Feature: gene Location: 111409-113082 bp Feature: domain Description: MPP_PhoD Location: 112165-112846 bp Feature: domain Description: MPP_PhoD Location: 112165-112846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SusD (NF033071), RVT-CRISPR, PhoD (pfam09423), MPP_PhoD (cd07389)