myRT

myRT report for GCA_011316265.1_ASM1131626v1

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Seq: MTRX01000178.1 Enterococcus faecium strain ERV212 contig_178, whole genome shotgun sequence (3257 bp)
Overview 1 RT 1: 1-3242 bp Neighborhood of RT #1 [1, 3256] RVT-AbiP2 HsdM Feature: gene Location: 1-1458 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 331-796 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 331 -796 bp Feature: gene Location: 1796-3256 bp Feature: domain Description: HsdM Location: 1817-3242 bp Feature: domain Description: HsdM Location: 1 81 7-3242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: MTRX01000272.1 Enterococcus faecium strain ERV212 contig_272, whole genome shotgun sequence (4404 bp)
Overview 1 RT 1: 3-4363 bp Neighborhood of RT #1 [3, 4401] AAA_10 RVT-GII AAA_10 Feature: gene Location: 3-509 bp Feature: domain Description: AAA_10 Location: 9-510 bp Feature: domain Description: AAA_10 Location: 9-510 bp Feature: gene Location: 643-2427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901-1600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901-1600 bp Feature: gene Location: 3166-4401 bp Feature: domain Description: AAA_10 Location: 4180-4363 bp Feature: domain Description: AAA_10 Location: 4180-4363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII

Seq: MTRX01000036.1 Enterococcus faecium strain ERV212 contig_36, whole genome shotgun sequence (9351 bp)
Overview 1 RT 1: 6069-9348 bp Neighborhood of RT #1 [6069, 9348] RVT-GII GIIM Feature: gene Location: 6069-6440 bp Feature: gene Location: 6444-6671 bp Feature: gene Location: 6774-8048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6975-7590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6975-7590 bp Feature: domain Description: GIIM Note: maturase Location: 7650-7860 bp Feature: domain Description: GIIM Note: maturase Location: 7650-7860 bp Feature: gene Location: 8616-9068 bp Feature: gene Location: 9070-9348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MTRX01000051.1 Enterococcus faecium strain ERV212 contig_51, whole genome shotgun sequence (15307 bp)
Overview 1 RT 1: 2194-7739 bp Neighborhood of RT #1 [2194, 7765] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK dcm Feature: gene Location: 2194-2538 bp Feature: domain Description: RelB_DinJ Location: 2404-2530 bp Feature: domain Description: RelB_DinJ Location: 24 04 -2530 bp Feature: gene Location: 2607-3623 bp Feature: domain Description: FtsK_SpoIIIE Location: 3264-3504 bp Feature: domain Description: FtsK_SpoIIIE Location: 3264 -3504 bp Feature: gene Location: 4217-6091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4583-5279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 583-5279 bp Feature: domain Description: HNHc Note: nucleases Location: 5819-5978 bp Feature: domain Description: HNHc Note: nucleases Location: 5819-5978 bp Feature: gene Location: 6193-6573 bp Feature: domain Description: FtsK Location: 6208-6445 bp Feature: domain Description: FtsK Location: 6208-64 4 5 bp Feature: gene Location: 6566-7765 bp Feature: domain Description: dcm Location: 6698-7739 bp Feature: domain Description: dcm Location: 6698-7739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), dcm (TIGR00675)

Seq: MTRX01000590.1 Enterococcus faecium strain ERV212 contig_591, whole genome shotgun sequence (2094 bp)
Overview 1 RT 1: 241-2032 bp Neighborhood of RT #1 [241, 2091] RVT-GII HNHc Feature: gene Location: 241-2091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 574-1312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 74-1312 bp Feature: domain Description: HNHc Note: nucleases Location: 1867-2032 bp Feature: domain Description: HNHc Note: nucleases Location: 1867-2032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MTRX01000085.1 Enterococcus faecium strain ERV212 contig_85, whole genome shotgun sequence (2689 bp)
Overview 1 RT 1: 711-1758 bp Neighborhood of RT #1 [711, 2573] RVT-GII Feature: gene Location: 711-2573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1020-1758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1020-1758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII