myRT

myRT report for GCA_011316825.1_ASM1131682v1

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Seq: WMAB01000026.1 Streptococcus equi subsp. zooepidemicus strain ISU54485 contig026, whole genome shotgun sequence (25908 bp)
Overview 1 RT 1: 4076-11766 bp Neighborhood of RT #1 [4076, 11849] Peptidase_M23 Phage_lysozyme2 PRK08581 TraC-F-type RVT_N RVT-GII GIIM TraC-F-type PrgI Feature: gene Location: 4076-6880 bp Feature: domain Description: Peptidase_M23 Location: 5522-5735 bp Feature: domain Description: Peptidase_M23 Location: 5522-5735 bp Feature: domain Description: Phage_lysozyme2 Location: 5879-6389 bp Feature: domain Description: Phage_lysozyme2 Location: 5879-6389 bp Feature: domain Description: PRK08581 Location: 6506-6842 bp Feature: domain Description: PRK08581 Location: 6506-6842 bp Feature: gene Location: 6877-8013 bp Feature: domain Description: TraC-F-type Location: 7138-7834 bp Feature: domain Description: TraC-F-type Location: 71 38-7834 bp Feature: gene Location: 7850-9547 bp Feature: RT Description: RVT_N Location: 7946-8186 bp Feature: RT Description: RVT_N Location: 7946-81 86 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8234-8894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8234-8894 bp Feature: domain Description: GIIM Note: maturase Location: 8963-9182 bp Feature: domain Description: GIIM Note: maturase Location: 8963-91 82 bp Feature: gene Location: 10052-11539 bp Feature: domain Description: TraC-F-type Location: 10379-11225 bp Feature: domain Description: TraC-F-type Location: 1 0379-1 1 225 bp Feature: gene Location: 11496-11849 bp Feature: domain Description: PrgI Location: 11508-11766 bp Feature: domain Description: PrgI Location: 1 1 508-1 1 766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), PrgI (pfam12666), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WMAB01000054.1 Streptococcus equi subsp. zooepidemicus strain ISU54485 contig054, whole genome shotgun sequence (13867 bp)
Overview 1 RT 1: 2458-10204 bp Neighborhood of RT #1 [2458, 10204] KOG4768 RVT-GII N6_Mtase COG4646 Feature: gene Location: 2458-2919 bp Feature: domain Description: KOG4768 Location: 2467-2905 bp Feature: domain Description: KOG4768 Location: 2 467-2 905 bp Feature: gene Location: 2971-3255 bp Feature: gene Location: 3286-4236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3547-4231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3547-42 31 bp Feature: gene Location: 4734-9818 bp Feature: domain Description: N6_Mtase Location: 6351-6942 bp Feature: domain Description: N6_Mtase Location: 6351-6942 bp Feature: domain Description: COG4646 Location: 7536-9663 bp Feature: domain Description: COG4646 Location: 7536-9663 bp Feature: gene Location: 9860-10204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )