myRT

myRT report for GCA_011316835.1_ASM1131683v1

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Seq: WMAA01000013.1 Streptococcus equi subsp. zooepidemicus strain ISU75596 contig013, whole genome shotgun sequence (35702 bp)
Overview 1 RT 1: 208-3167 bp Neighborhood of RT #1 [208, 3208] RVT-GII TraG-D_C SSB_OBF Feature: gene Location: 208-2118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517-1273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 7-1 273 bp Feature: gene Location: 2128-2733 bp Feature: domain Description: TraG-D_C Location: 2221-2542 bp Feature: domain Description: TraG-D_C Location: 2221 -2542 bp Feature: gene Location: 2897-3208 bp Feature: domain Description: SSB_OBF Location: 2921-3167 bp Feature: domain Description: SSB_OBF Location: 2921 -31 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TraG-D_C (pfam12696), SSB_OBF (cd04496)

Seq: WMAA01000034.1 Streptococcus equi subsp. zooepidemicus strain ISU75596 contig034, whole genome shotgun sequence (21213 bp)
Overview 1 RT 1: 13622-21211 bp Neighborhood of RT #1 [13622, 21211] PRK13922 PRK13927 RVT-GII Intron_maturas2 HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 13622-14506 bp Feature: domain Description: PRK13922 Location: 13625-14453 bp Feature: domain Description: PRK1392 2 Location: 1362 5-14453 bp Feature: gene Location: 14747-15769 bp Feature: domain Description: PRK13927 Location: 14759-15752 bp Feature: domain Description: PRK1392 7 Location: 14759-15752 bp Feature: gene Location: 16222-18111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16492-17332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16492 -17332 bp Feature: domain Description: Intron_maturas2 Location: 17503-17695 bp Feature: domain Description: Intron_maturas2 Location: 17503-17695 bp Feature: domain Description: HNHc Note: nucleases Location: 17878-18055 bp Feature: domain Description: HNHc Note: nucleases Location: 17878-18055 bp Feature: gene Location: 18844-20715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19168-19999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19168-19999 bp Feature: domain Description: Intron_maturas2 Location: 20077-20482 bp Feature: domain Description: Intron_maturas2 Location: 2 0077-2 0482 bp Feature: domain Description: HNHc Note: nucleases Location: 20512-20686 bp Feature: domain Description: HNHc Note: nucleases Location: 2 0512 -2 0686 bp Feature: gene Location: 21083-21211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: WMAA01000141.1 Streptococcus equi subsp. zooepidemicus strain ISU75596 contig141, whole genome shotgun sequence (1769 bp)
Overview 1 RT 1: 208-1273 bp Neighborhood of RT #1 [208, 1767] RVT-GII Feature: gene Location: 208-1767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517-1273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517-1273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII