myRT

myRT report for GCA_011317105.1_ASM1131710v1

Download annotations/find similar RTs

Seq: WOFY01000027.1 Streptococcus equi subsp. zooepidemicus strain IA-61192 contig027, whole genome shotgun sequence (30054 bp)
Overview 1 RT 1: 3491-13321 bp 2 RT 2: 21202-28112 bp Neighborhood of RT #1 [3491, 13321] KOG1000 KOG4768 RVT-GII N6_Mtase COG4646 Neighborhood of RT #2 [21202, 28195] Peptidase_M23 Phage_lysozyme2 TraC-F-type RVT_N RVT-GII GIIM TraC-F-type PrgI Feature: gene Location: 3491-4834 bp Feature: domain Description: KOG1000 Location: 3770-4085 bp Feature: domain Description: KOG1 000 Location: 3770-4085 bp Feature: gene Location: 4972-5769 bp Feature: domain Description: KOG4768 Location: 4981-5755 bp Feature: domain Description: KOG4768 Location: 4981 -5755 bp Feature: gene Location: 5800-6750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6061-6745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6061 -6745 bp Feature: gene Location: 7248-12719 bp Feature: domain Description: N6_Mtase Location: 9252-9852 bp Feature: domain Description: N6_Mtase Location: 9252-9852 bp Feature: domain Description: COG4646 Location: 10434-12564 bp Feature: domain Description: COG4646 Location: 1 0434-1 2564 bp Feature: gene Location: 12770-13321 bp Feature: gene Location: 21202-23226 bp Feature: domain Description: Peptidase_M23 Location: 22648-22861 bp Feature: domain Description: Peptidase_M23 Location: 22648-22861 bp Feature: domain Description: Phage_lysozyme2 Location: 23005-23131 bp Feature: domain Description: Phage_lysozyme2 Location: 23005-231 31 bp Feature: gene Location: 23223-24191 bp Feature: domain Description: TraC-F-type Location: 23316-24012 bp Feature: domain Description: TraC-F-type Location: 2331 6-2401 2 bp Feature: gene Location: 24196-25893 bp Feature: RT Description: RVT_N Location: 24292-24532 bp Feature: RT Description: RVT_N Location: 24292-24532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24580-25240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24580-25240 bp Feature: domain Description: GIIM Note: maturase Location: 25309-25528 bp Feature: domain Description: GIIM Note: maturase Location: 25309-25528 bp Feature: gene Location: 26398-27885 bp Feature: domain Description: TraC-F-type Location: 26716-27568 bp Feature: domain Description: TraC-F-type Location: 2671 6-27568 bp Feature: gene Location: 27842-28195 bp Feature: domain Description: PrgI Location: 27854-28112 bp Feature: domain Description: PrgI Location: 27854-281 1 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), TraC-F-type (TIGR02746), RVT_N (pfam13655), GIIM (pfam08388)
PrgI (pfam12666)

Seq: WOFY01000047.1 Streptococcus equi subsp. zooepidemicus strain IA-61192 contig047, whole genome shotgun sequence (12348 bp)
Overview 1 RT 1: 4578-9262 bp Neighborhood of RT #1 [4578, 9267] MobC Relaxase RVT-GII Intron_maturas2 Relaxase YozG Feature: gene Location: 4578-4958 bp Feature: domain Description: MobC Location: 4791-4887 bp Feature: domain Description: MobC Location: 4791-4887 bp Feature: gene Location: 4958-5320 bp Feature: domain Description: Relaxase Location: 4988-5285 bp Feature: domain Description: Relaxase Location: 4988-52 85 bp Feature: gene Location: 5857-7659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6133-6937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6133-6937 bp Feature: domain Description: Intron_maturas2 Location: 7045-7324 bp Feature: domain Description: Intron_maturas2 Location: 7045-732 4 bp Feature: gene Location: 7805-8902 bp Feature: domain Description: Relaxase Location: 7814-8201 bp Feature: domain Description: Relaxase Location: 7814-82 01 bp Feature: gene Location: 9061-9267 bp Feature: domain Description: YozG Location: 9076-9262 bp Feature: domain Description: YozG Location: 9076-92 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobC (pfam05713), Relaxase (pfam03432), RVT-GII, Intron_maturas2 (pfam01348), YozG (COG3655)

Seq: WOFY01000070.1 Streptococcus equi subsp. zooepidemicus strain IA-61192 contig070, whole genome shotgun sequence (2825 bp)
Overview 1 RT 1: 498-1874 bp Neighborhood of RT #1 [498, 2719] RVT-GII Feature: gene Location: 498-662 bp Feature: gene Location: 809-2719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118-1874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118-1874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII