myRT

myRT report for GCA_011320425.1_ASM1132042v1

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Seq: JAANXZ010000001.1 Sutterella wadsworthensis strain 809h contig_1, whole genome shotgun sequence (183990 bp)
Overview 1 RT 1: 14878-20838 bp Neighborhood of RT #1 [14878, 20876] EmrA ABC2_membrane_3 RVT-GII GIIM RVT-GII flavo_cyto_c Feature: gene Location: 14878-16011 bp Feature: domain Description: EmrA Location: 14917-15883 bp Feature: domain Description: EmrA Location: 1 491 7-1 5883 bp Feature: gene Location: 16008-17306 bp Feature: domain Description: ABC2_membrane_3 Location: 16107-17136 bp Feature: domain Description: ABC2_membrane_3 Location: 1 61 07-1 71 36 bp Feature: gene Location: 17436-18005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17445-17583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7445-1 7583 bp Feature: domain Description: GIIM Note: maturase Location: 17634-17862 bp Feature: domain Description: GIIM Note: maturase Location: 1 7634-1 7862 bp Feature: gene Location: 17947-18666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18148-18634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 48-1 8634 bp Feature: gene Location: 19042-19266 bp Feature: gene Location: 19332-20876 bp Feature: domain Description: flavo_cyto_c Location: 19464-20838 bp Feature: domain Description: flavo_cyto_c Location: 1 9464-20838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EmrA (COG1566), ABC2_membrane_3 (pfam12698), RVT-GII, GIIM (pfam08388), flavo_cyto_c (TIGR01813)

Seq: JAANXZ010000015.1 Sutterella wadsworthensis strain 809h contig_15, whole genome shotgun sequence (65729 bp)
Overview 1 RT 1: 11363-14194 bp Neighborhood of RT #1 [11363, 14194] HTH_XRE RVT-Retrons COG5421 Feature: gene Location: 11363-11677 bp Feature: gene Location: 11731-12021 bp Feature: domain Description: HTH_XRE Location: 11752-11908 bp Feature: domain Description: HTH_XRE Location: 11752 -11908 bp Feature: gene Location: 12002-12964 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12158-12722 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 158-12 72 2 bp Feature: gene Location: 13389-13913 bp Feature: domain Description: COG5421 Location: 13566-13857 bp Feature: domain Description: COG542 1 Location: 13566-13857 bp Feature: gene Location: 13916-14194 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, COG5421 (Transposase )