myRT

myRT report for GCA_011321815.1_ASM1132181v1

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Seq: DROS01000013.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-540 HyVt-540_k145_1177461, whole genome shotgun sequence (67474 bp)
Overview 1 RT 1: 65195-67293 bp Neighborhood of RT #1 [65195, 67293] DDE_3 RVT-GII RVT-GII GIIM Feature: gene Location: 65195-65332 bp Feature: gene Location: 65376-65597 bp Feature: domain Description: DDE_3 Location: 65382-65568 bp Feature: domain Description: DDE_3 Location: 65382-65568 bp Feature: gene Location: 65758-66930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65956-66403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65956-66403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66406-66526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66406-66526 bp Feature: domain Description: GIIM Note: maturase Location: 66607-66838 bp Feature: domain Description: GIIM Note: maturase Location: 66607-66838 bp Feature: gene Location: 66934-67293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)

Seq: DROS01000044.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-540 HyVt-540_k145_201257, whole genome shotgun sequence (13391 bp)
Overview 1 RT 1: 3-1990 bp Neighborhood of RT #1 [3, 2085] RVT-GII COG3415 DDE_3 Feature: gene Location: 3-155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-138 bp Feature: gene Location: 559-756 bp Feature: gene Location: 1051-2085 bp Feature: domain Description: COG3415 Location: 1108-1519 bp Feature: domain Description: COG3415 Location: 1108-1519 bp Feature: domain Description: DDE_3 Location: 1564-1990 bp Feature: domain Description: DDE_3 Location: 1564-1990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG3415 (Transposase ), DDE_3 (pfam13358)

Seq: DROS01000065.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-540 HyVt-540_k145_394932, whole genome shotgun sequence (18670 bp)
Overview 1 RT 1: 14713-17892 bp Neighborhood of RT #1 [14713, 17892] RluA RVT-GII AraC_E_bind Feature: gene Location: 14713-15396 bp Feature: domain Description: RluA Location: 14758-15394 bp Feature: domain Description: RluA Location: 14758-153 94 bp Feature: gene Location: 15683-16198 bp Feature: gene Location: 16195-16527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16387-16519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163 87-16519 bp Feature: gene Location: 16792-17247 bp Feature: domain Description: AraC_E_bind Location: 16798-17242 bp Feature: domain Description: AraC_E_bind Location: 16798-17242 bp Feature: gene Location: 17539-17892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RluA (COG0564), RVT-GII, AraC_E_bind (smart00871)