myRT

myRT report for GCA_011321935.1_ASM1132193v1

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Seq: DROJ01000052.1 TPA_asm: Bacteroidetes bacterium isolate HyVt-532 HyVt-532_k145_1095076, whole genome shotgun sequence (19786 bp)
Overview 1 RT 1: 3162-11212 bp Neighborhood of RT #1 [3162, 11214] RVT-UG5 PadR ADOP Feature: gene Location: 3162-3668 bp Feature: gene Location: 3826-4506 bp Feature: gene Location: 4510-7623 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5020-5548 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5020-5548 bp Feature: gene Location: 7909-8238 bp Feature: domain Description: PadR Location: 7975-8197 bp Feature: domain Description: PadR Location: 7975-81 97 bp Feature: gene Location: 8584-11214 bp Feature: domain Description: ADOP Location: 8821-11212 bp Feature: domain Description: ADOP Location: 8821 -1 1 21 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, PadR (pfam03551), ADOP (TIGR03434)

Seq: DROJ01000118.1 TPA_asm: Bacteroidetes bacterium isolate HyVt-532 HyVt-532_k145_1210485, whole genome shotgun sequence (13221 bp)
Overview 1 RT 1: 1-2680 bp Neighborhood of RT #1 [1, 2680] 23S_rRNA_IVP RVT-Retrons Cas6b_N Cas6b_C Feature: gene Location: 1-375 bp Feature: domain Description: 23S_rRNA_IVP Location: 25-328 bp Feature: domain Description: 2 3S_rRNA_IVP Location: 2 5-32 8 bp Feature: gene Location: 461-1504 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 605-1178 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 605-1178 bp Feature: gene Location: 1656-2381 bp Feature: domain Description: Cas6b_N Location: 1671-1905 bp Feature: domain Description: Cas6b_N Location: 1671-1905 bp Feature: domain Description: Cas6b_C Location: 1992-2316 bp Feature: domain Description: Cas6b_C Location: 1992 -2 316 bp Feature: gene Location: 2375-2680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 23S_rRNA_IVP (pfam05635), RVT-Retrons, Cas6b_N (pfam17955), Cas6b_C