myRT

myRT report for GCA_011322685.1_ASM1132268v1

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Seq: DRMC01000033.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-479 HyVt-479_k145_1047473, whole genome shotgun sequence (2609 bp)
Overview 1 RT 1: 474-2548 bp Neighborhood of RT #1 [474, 2607] COG1569 HicB RVT-GII GIIM Feature: gene Location: 474-896 bp Feature: domain Description: COG1569 Location: 489-888 bp Feature: domain Description: COG1 569 Location: 489-888 bp Feature: gene Location: 902-1126 bp Feature: domain Description: HicB Location: 911-1001 bp Feature: domain Description: HicB Location: 91 1 -1 001 bp Feature: gene Location: 1249-2607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1585-2242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 585-2242 bp Feature: domain Description: GIIM Note: maturase Location: 2323-2548 bp Feature: domain Description: GIIM Note: maturase Location: 2323-2548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG1569 (Predicted nucleic acid-binding protein, contains PIN domain ), HicB (pfam05534)

Seq: DRMC01000448.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-479 HyVt-479_k145_692762, whole genome shotgun sequence (5507 bp)
Overview 1 RT 1: 2-5505 bp Neighborhood of RT #1 [2, 5505] HipB RVT-Retrons Feature: gene Location: 2-319 bp Feature: domain Description: HipB Location: 26-275 bp Feature: domain Description: HipB Location: 2 6-2 75 bp Feature: gene Location: 300-1259 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 438-1005 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 438-1005 bp Feature: gene Location: 1260-5315 bp Feature: gene Location: 5338-5505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), RVT-Retrons

Seq: DRMC01000482.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-479 HyVt-479_k145_754580, whole genome shotgun sequence (5169 bp)
Overview 1 RT 1: 1-4652 bp Neighborhood of RT #1 [1, 4660] RVT-Retrons COG0610 Feature: gene Location: 1-480 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103-478 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103 -478 bp Feature: gene Location: 477-1376 bp Feature: gene Location: 1655-4660 bp Feature: domain Description: COG0610 Location: 1865-4652 bp Feature: domain Description: COG0610 Location: 1865-4652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )