myRT

myRT report for GCA_011326835.1_ASM1132683v1

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Seq: JAAAEG010000002.1 Streptococcus agalactiae strain iGBS393 NODE_2_length_229739_cov_100.971, whole genome shotgun sequence (229739 bp)
Overview 1 RT 1: 40224-50393 bp Neighborhood of RT #1 [40224, 50393] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 40224-40775 bp Feature: gene Location: 40825-46266 bp Feature: domain Description: N6_Mtase Location: 42817-43408 bp Feature: domain Description: N6_Mtase Location: 4281 7-43408 bp Feature: domain Description: COG4646 Location: 43999-46123 bp Feature: domain Description: COG4646 Location: 43999-461 23 bp Feature: gene Location: 46764-48542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47025-47817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47025-4781 7 bp Feature: domain Description: Intron_maturas2 Location: 47922-48153 bp Feature: domain Description: Intron_maturas2 Location: 47922-481 53 bp Feature: domain Description: HNHc Note: nucleases Location: 48318-48504 bp Feature: domain Description: HNHc Note: nucleases Location: 4831 8-48504 bp Feature: gene Location: 48680-50023 bp Feature: domain Description: KOG1000 Location: 48959-49274 bp Feature: domain Description: KOG1 000 Location: 48959-49274 bp Feature: gene Location: 50094-50393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: JAAAEG010000035.1 Streptococcus agalactiae strain iGBS393 NODE_36_length_1863_cov_489.75, whole genome shotgun sequence (1863 bp)
Overview 1 RT 1: 67-1861 bp Neighborhood of RT #1 [67, 1861] RVT-GII GIIM Feature: gene Location: 67-1377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-919 bp Feature: domain Description: GIIM Note: maturase Location: 973-1189 bp Feature: domain Description: GIIM Note: maturase Location: 973-1189 bp Feature: gene Location: 1709-1861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)