myRT

myRT report for GCA_011327005.1_ASM1132700v1

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Seq: JAAADS010000002.1 Streptococcus agalactiae strain iGBS310 NODE_2_length_207861_cov_86.335, whole genome shotgun sequence (207861 bp)
Overview 1 RT 1: 102453-105333 bp Neighborhood of RT #1 [102453, 105506] PRK07275 PRK07275 RVT-GII GIIM HTH_XRE Feature: gene Location: 102453-102869 bp Feature: domain Description: PRK07275 Location: 102456-102792 bp Feature: domain Description: PRK07275 Location: 1 02456-1 02792 bp Feature: domain Description: PRK07275 Location: 102819-102867 bp Feature: domain Description: PRK07275 Location: 1 0281 9-1 02867 bp Feature: gene Location: 103020-103208 bp Feature: gene Location: 103450-104769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103750-104383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 03750-1 04383 bp Feature: domain Description: GIIM Note: maturase Location: 104452-104674 bp Feature: domain Description: GIIM Note: maturase Location: 1 04452-1 04674 bp Feature: gene Location: 104902-105162 bp Feature: gene Location: 105159-105506 bp Feature: domain Description: HTH_XRE Location: 105171-105333 bp Feature: domain Description: HTH_XRE Location: 1 051 71 -1 05333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07275 (single-stranded DNA-binding protein; Provisional), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530)

Seq: JAAADS010000007.1 Streptococcus agalactiae strain iGBS310 NODE_7_length_89114_cov_91.753, whole genome shotgun sequence (89114 bp)
Overview 1 RT 1: 35937-46106 bp Neighborhood of RT #1 [35937, 46106] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 35937-36236 bp Feature: gene Location: 36307-37650 bp Feature: domain Description: KOG1000 Location: 36586-36901 bp Feature: domain Description: KOG1000 Location: 36586-36901 bp Feature: gene Location: 37788-39575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38058-38850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38058-38850 bp Feature: domain Description: Intron_maturas2 Location: 38955-39186 bp Feature: domain Description: Intron_maturas2 Location: 38955-39186 bp Feature: domain Description: HNHc Note: nucleases Location: 39351-39537 bp Feature: domain Description: HNHc Note: nucleases Location: 39351-39537 bp Feature: gene Location: 40064-45505 bp Feature: domain Description: N6_Mtase Location: 42056-42647 bp Feature: domain Description: N6_Mtase Location: 42 056-42 647 bp Feature: domain Description: COG4646 Location: 43238-45362 bp Feature: domain Description: COG4646 Location: 432 38-45362 bp Feature: gene Location: 45555-46106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )