myRT

myRT report for GCA_011327115.1_ASM1132711v1

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Seq: JAAADN010000002.1 Streptococcus agalactiae strain iGBS284 NODE_2_length_262193_cov_110.818, whole genome shotgun sequence (262193 bp)
Overview 1 RT 1: 205420-215589 bp Neighborhood of RT #1 [205420, 215589] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 205420-205971 bp Feature: gene Location: 206021-211462 bp Feature: domain Description: N6_Mtase Location: 208013-208604 bp Feature: domain Description: N6_Mtase Location: 20801 3-208604 bp Feature: domain Description: COG4646 Location: 209198-211319 bp Feature: domain Description: COG4646 Location: 2091 98-21 1 31 9 bp Feature: gene Location: 211960-213738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212221-213013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 2221 -21 301 3 bp Feature: domain Description: Intron_maturas2 Location: 213118-213349 bp Feature: domain Description: Intron_maturas2 Location: 21 31 1 8-21 3349 bp Feature: domain Description: HNHc Note: nucleases Location: 213514-213700 bp Feature: domain Description: HNHc Note: nucleases Location: 21 351 4-21 3700 bp Feature: gene Location: 213876-215219 bp Feature: domain Description: KOG1000 Location: 214155-214470 bp Feature: domain Description: KOG1 000 Location: 21 41 55-21 4470 bp Feature: gene Location: 215290-215589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: JAAADN010000003.1 Streptococcus agalactiae strain iGBS284 NODE_3_length_221858_cov_115.536, whole genome shotgun sequence (221858 bp)
Overview 1 RT 1: 116450-119330 bp Neighborhood of RT #1 [116450, 119503] PRK07275 PRK07275 RVT-GII GIIM HTH_XRE Feature: gene Location: 116450-116866 bp Feature: domain Description: PRK07275 Location: 116453-116789 bp Feature: domain Description: PRK072 75 Location: 116453-116789 bp Feature: domain Description: PRK07275 Location: 116816-116864 bp Feature: domain Description: PRK072 75 Location: 116816-116864 bp Feature: gene Location: 117017-117205 bp Feature: gene Location: 117447-118766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117747-118380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117747-118380 bp Feature: domain Description: GIIM Note: maturase Location: 118449-118671 bp Feature: domain Description: GIIM Note: maturase Location: 118449-118671 bp Feature: gene Location: 118899-119159 bp Feature: gene Location: 119156-119503 bp Feature: domain Description: HTH_XRE Location: 119168-119330 bp Feature: domain Description: HTH_XRE Location: 119168-119330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07275 (single-stranded DNA-binding protein; Provisional), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530)