myRT

myRT report for GCA_011329145.1_ASM1132914v1

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Seq: DSUC01000072.1 TPA_asm: Planctomycetes bacterium isolate SpSt-472 Ga0101944_10004125, whole genome shotgun sequence (18615 bp)
Overview 1 RT 1: 7851-16568 bp Neighborhood of RT #1 [7851, 16618] PRK09414 GH_F GH43-like RVT-Retrons PDZ_2 SASA Laminin_G_3 Feature: gene Location: 7851-9194 bp Feature: domain Description: PRK09414 Location: 7857-9192 bp Feature: domain Description: PRK0941 4 Location: 7857-91 92 bp Feature: gene Location: 9656-10651 bp Feature: domain Description: GH_F Location: 9788-10433 bp Feature: domain Description: GH_F Location: 9788-1 0433 bp Feature: domain Description: GH43-like Location: 10463-10580 bp Feature: domain Description: GH43-like Location: 1 0463-1 0580 bp Feature: gene Location: 10764-12044 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11184-11799 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 1 84-1 1 799 bp Feature: gene Location: 12415-13554 bp Feature: domain Description: PDZ_2 Location: 13282-13519 bp Feature: domain Description: PDZ_2 Location: 1 3282-1 351 9 bp Feature: gene Location: 13571-16618 bp Feature: domain Description: SASA Location: 14096-14876 bp Feature: domain Description: SASA Location: 1 4096-1 4876 bp Feature: domain Description: Laminin_G_3 Location: 16271-16568 bp Feature: domain Description: Laminin_G_3 Location: 1 6271 -1 6568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PDZ_2 (pfam13180), SASA (pfam03629), Laminin_G_3 (pfam13385), PRK09414 (NADP-specific glutamate dehydrogenase), GH_F (cd08978), GH43-like (cd08986)

Seq: DSUC01000287.1 TPA_asm: Planctomycetes bacterium isolate SpSt-472 Ga0101944_10017077, whole genome shotgun sequence (5311 bp)
Overview 1 RT 1: 2-4721 bp Neighborhood of RT #1 [2, 4721] STKc_PknB_like YfmG RVT-DGRs Feature: gene Location: 2-2206 bp Feature: domain Description: STKc_PknB_like Location: 5-857 bp Feature: domain Description: STKc_PknB_like Location: 5-857 bp Feature: domain Description: YfmG Location: 1412-2186 bp Feature: domain Description: YfmG Location: 1412 -2 186 bp Feature: gene Location: 2106-2399 bp Feature: gene Location: 2441-3505 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2651-3293 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 651-32 93 bp Feature: gene Location: 3621-4094 bp Feature: gene Location: 4446-4721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), YfmG (COG1262), RVT-DGRs

Seq: DSUC01000259.1 TPA_asm: Planctomycetes bacterium isolate SpSt-472 Ga0101944_10040248, whole genome shotgun sequence (2652 bp)
Overview 1 RT 1: 268-2646 bp Neighborhood of RT #1 [268, 2646] group_II_RT_mat RVT-GII Feature: gene Location: 268-417 bp Feature: gene Location: 517-882 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 550-763 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 550-763 bp Feature: gene Location: 978-2324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1719-2181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1719-2181 bp Feature: gene Location: 2092-2646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII