myRT

myRT report for GCA_011330835.1_ASM1133083v1

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Seq: DRPO01000368.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-560 HyVt-560_k145_404930, whole genome shotgun sequence (5754 bp)
Overview 1 RT 1: 1-3062 bp Neighborhood of RT #1 [1, 3199] VapI RVT-CRISPR Cas_Cas1 CRISPR_Cas2 Feature: gene Location: 1-300 bp Feature: domain Description: VapI Location: 22-280 bp Feature: domain Description: VapI Location: 22-280 bp Feature: gene Location: 1019-1831 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1202-1802 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 202-1 802 bp Feature: gene Location: 1851-2846 bp Feature: domain Description: Cas_Cas1 Location: 1863-2709 bp Feature: domain Description: Cas_Cas1 Location: 1 863-2709 bp Feature: gene Location: 2843-3199 bp Feature: domain Description: CRISPR_Cas2 Location: 2864-3062 bp Feature: domain Description: CRISPR_Cas2 Location: 2864-3062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VapI (COG3093), RVT-CRISPR, Cas_Cas1 (pfam01867), CRISPR_Cas2 (pfam09827)

Seq: DRPO01000464.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-560 HyVt-560_k145_590999, whole genome shotgun sequence (10188 bp)
Overview 1 RT 1: 7895-9670 bp Neighborhood of RT #1 [7895, 9699] Cas_Cas1 RVT-CRISPR Feature: gene Location: 7895-8110 bp Feature: gene Location: 7862-8863 bp Feature: domain Description: Cas_Cas1 Location: 7871-8723 bp Feature: domain Description: Cas_Cas1 Location: 7871-872 3 bp Feature: gene Location: 8860-9699 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9070-9670 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9070-9670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas1 (pfam01867), RVT-CRISPR

Seq: DRPO01000545.1 TPA_asm: Gammaproteobacteria bacterium isolate HyVt-560 HyVt-560_k145_760374, whole genome shotgun sequence (3552 bp)
Overview 1 RT 1: 54-3395 bp Neighborhood of RT #1 [54, 3550] TIGR03986 CRISPR_Cas6 RVT-CRISPR Feature: gene Location: 54-1619 bp Feature: domain Description: TIGR03986 Location: 282-1320 bp Feature: domain Description: TIGR03 986 Location: 282-13 20 bp Feature: gene Location: 1703-3550 bp Feature: domain Description: CRISPR_Cas6 Location: 2390-2555 bp Feature: domain Description: CRISPR_Cas6 Location: 23 90-2555 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2801-3395 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2801-3 3 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03986 (CRISPR-associated protein), CRISPR_Cas6 (pfam10040), RVT-CRISPR