myRT

myRT report for GCA_011331465.1_ASM1133146v1

Download annotations/find similar RTs

Seq: DSRU01000098.1 TPA_asm: Oscillatoriales cyanobacterium SpSt-418 Ga0073934_10029956, whole genome shotgun sequence (5278 bp)
Overview 1 RT 1: 238-4918 bp Neighborhood of RT #1 [238, 5181] recD_rel RVT_N RVT-GII Recombinase Zn_ribbon_recom Recombinase Feature: gene Location: 238-2469 bp Feature: domain Description: recD_rel Location: 295-2455 bp Feature: domain Description: recD_rel Location: 295-2455 bp Feature: gene Location: 3151-3315 bp Feature: gene Location: 3365-3781 bp Feature: RT Description: RVT_N Location: 3410-3653 bp Feature: RT Description: RVT_N Location: 341 0-3653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3704-3749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3704-3749 bp Feature: gene Location: 3874-5181 bp Feature: domain Description: Recombinase Location: 3931-4039 bp Feature: domain Description: Recombinase Location: 3931 -4039 bp Feature: domain Description: Zn_ribbon_recom Location: 4096-4273 bp Feature: domain Description: Zn_ribbon_recom Location: 4096-4273 bp Feature: domain Description: Recombinase Location: 4789-4918 bp Feature: domain Description: Recombinase Location: 4789-491 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recD_rel (TIGR01448), RVT_N (pfam13655), RVT-GII, Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: DSRU01000330.1 TPA_asm: Oscillatoriales cyanobacterium SpSt-418 Ga0073934_10058402, whole genome shotgun sequence (3256 bp)
Overview 1 RT 1: 29-1260 bp Neighborhood of RT #1 [29, 1388] RVT-GII GIIM HNHc Feature: gene Location: 29-298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119-290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119-2 90 bp Feature: gene Location: 392-988 bp Feature: domain Description: GIIM Note: maturase Location: 473-704 bp Feature: domain Description: GIIM Note: maturase Location: 473-704 bp Feature: gene Location: 1095-1388 bp Feature: domain Description: HNHc Note: nucleases Location: 1110-1260 bp Feature: domain Description: HNHc Note: nucleases Location: 1110-12 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNHc (smart00507), RVT-GII, GIIM (pfam08388)