myRT

myRT report for GCA_011362645.1_ASM1136264v1

Download annotations/find similar RTs

Seq: DSSF01000053.1 TPA_asm: Geobacter sp. isolate SpSt-428 Ga0073934_10000499, whole genome shotgun sequence (110860 bp)
Overview 1 RT 1: 47648-53889 bp Neighborhood of RT #1 [47648, 53889] RVT_N RVT-GII YkfC HNH ResIII Feature: gene Location: 47648-48604 bp Feature: gene Location: 48625-48795 bp Feature: gene Location: 49106-50893 bp Feature: RT Description: RVT_N Location: 49256-49499 bp Feature: RT Description: RVT_N Location: 49256-49499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49544-50186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49544-501 86 bp Feature: domain Description: YkfC Location: 50321-50504 bp Feature: domain Description: YkfC Location: 50321 -50504 bp Feature: domain Description: HNH Note: nucleases Location: 50702-50840 bp Feature: domain Description: HNH Note: nucleases Location: 50702-50840 bp Feature: gene Location: 51012-53387 bp Feature: domain Description: ResIII Location: 51273-52002 bp Feature: domain Description: ResIII Location: 51 273-52002 bp Feature: gene Location: 53464-53889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), ResIII (pfam04851)

Seq: DSSF01000073.1 TPA_asm: Geobacter sp. isolate SpSt-428 Ga0073934_10005258, whole genome shotgun sequence (20285 bp)
Overview 1 RT 1: 10292-13115 bp Neighborhood of RT #1 [10292, 13225] Avd_like RVT-DGRs DivIC MLTF_like Feature: gene Location: 10292-10648 bp Feature: domain Description: Avd_like Location: 10310-10619 bp Feature: domain Description: Avd_like Location: 10310-10619 bp Feature: gene Location: 10678-10833 bp Feature: gene Location: 11078-11995 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11183-11792 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11183-11792 bp Feature: gene Location: 12023-12304 bp Feature: domain Description: DivIC Location: 12110-12269 bp Feature: domain Description: DivIC Location: 12 110-12 2 69 bp Feature: gene Location: 12326-13225 bp Feature: domain Description: MLTF_like Location: 12986-13115 bp Feature: domain Description: MLTF_like Location: 12 986-13115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, DivIC (pfam04977), MLTF_like