myRT

myRT report for GCA_011367385.1_ASM1136738v1

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Seq: DSYV01000087.1 TPA_asm: Chloroflexi bacterium isolate SpSt-583 Ga0101944_10001117, whole genome shotgun sequence (61643 bp)
Overview 1 RT 1: 42400-47954 bp Neighborhood of RT #1 [42400, 48454] SH3_3 SH3_3 PA14 PA14 PA14 Avd_like RVT-DGRs MPP_YbbF-LpxH Feature: gene Location: 42400-44130 bp Feature: domain Description: SH3_3 Location: 42535-42688 bp Feature: domain Description: SH3_3 Location: 42535-42688 bp Feature: domain Description: SH3_3 Location: 42766-42922 bp Feature: domain Description: SH3_3 Location: 42766-42922 bp Feature: domain Description: PA14 Location: 43012-43360 bp Feature: domain Description: PA1 4 Location: 4301 2-43360 bp Feature: domain Description: PA14 Location: 43390-43747 bp Feature: domain Description: PA1 4 Location: 43390-43747 bp Feature: domain Description: PA14 Location: 43771-44128 bp Feature: domain Description: PA1 4 Location: 43771 -441 28 bp Feature: gene Location: 44761-45114 bp Feature: domain Description: Avd_like Location: 44782-45088 bp Feature: domain Description: Avd_like Location: 44782-45088 bp Feature: gene Location: 45117-45488 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45120-45273 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 451 20-45273 bp Feature: gene Location: 45974-47302 bp Feature: gene Location: 47354-48454 bp Feature: domain Description: MPP_YbbF-LpxH Location: 47501-47954 bp Feature: domain Description: MPP_YbbF-LpxH Location: 47501 -47954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SH3_3 (pfam08239), PA14 (smart00758), Avd_like (cd16376), RVT-DGRs, MPP_YbbF-LpxH (cd07398)

Seq: DSYV01000215.1 TPA_asm: Chloroflexi bacterium isolate SpSt-583 Ga0101944_10002973, whole genome shotgun sequence (25215 bp)
Overview 1 RT 1: 16852-20613 bp Neighborhood of RT #1 [16852, 20663] Cas6 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 16852-17253 bp Feature: gene Location: 17256-18125 bp Feature: domain Description: Cas6 Location: 17331-18063 bp Feature: domain Description: Cas6 Location: 17331-18063 bp Feature: gene Location: 18184-19176 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 18403-19054 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 18403-19054 bp Feature: gene Location: 19254-20318 bp Feature: domain Description: Cas1_I-II-III Location: 19263-20280 bp Feature: domain Description: Cas1_I-II-III Location: 192 63-2 02 80 bp Feature: gene Location: 20379-20663 bp Feature: domain Description: Cas2_I_II_III Location: 20400-20613 bp Feature: domain Description: Cas2 _I_II_III Location: 2 0400-2 0613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas6 (pfam09559), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: DSYV01000031.1 TPA_asm: Chloroflexi bacterium isolate SpSt-583 Ga0101944_10037250, whole genome shotgun sequence (2819 bp)
Overview 1 RT 1: 3-2640 bp Neighborhood of RT #1 [3, 2816] RVT-GII vWFA vWFA GATase1_like Feature: gene Location: 3-2513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2082-2511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2082-2511 bp Feature: gene Location: 690-2816 bp Feature: domain Description: vWFA Location: 852-1011 bp Feature: domain Description: vWFA Location: 852-1011 bp Feature: domain Description: vWFA Location: 1725-2235 bp Feature: domain Description: vWFA Location: 1725-223 5 bp Feature: domain Description: GATase1_like Location: 2352-2640 bp Feature: domain Description: GATase1_like Location: 23 52-2640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, vWFA (cl00057), GATase1_like (pfam07090)