myRT

myRT report for GCA_011371025.1_ASM1137102v1

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Seq: DRSA01000439.1 TPA_asm: Bacteroidetes bacterium isolate HyVt-619 HyVt-619_k295_194905, whole genome shotgun sequence (2442 bp)
Overview 1 RT 1: 2-2441 bp Neighborhood of RT #1 [2, 2440] Cas6b_N Cas6b_C RVT-Retrons Cas1_I-II-III Feature: gene Location: 2-643 bp Feature: domain Description: Cas6b_N Location: 53-278 bp Feature: domain Description: Cas6b_N Location: 53-278 bp Feature: domain Description: Cas6b_C Location: 290-620 bp Feature: domain Description: Cas6b_C Location: 290-620 bp Feature: gene Location: 690-1715 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 834-1401 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 834-1 401 bp Feature: gene Location: 1727-2440 bp Feature: domain Description: Cas1_I-II-III Location: 1736-2441 bp Feature: domain Description: Cas1 _I-II-III Location: 1 736-2441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), Cas6b_N (pfam17955), Cas6b_C, RVT-Retrons

Seq: DRSA01000729.1 TPA_asm: Bacteroidetes bacterium isolate HyVt-619 HyVt-619_k295_253063, whole genome shotgun sequence (3088 bp)
Overview 1 RT 1: 3-3085 bp Neighborhood of RT #1 [3, 3087] Arch_GlmM RVT-GII GIIM Cah Feature: gene Location: 3-209 bp Feature: domain Description: Arch_GlmM Location: 6-189 bp Feature: domain Description: Arch_GlmM Location: 6-189 bp Feature: gene Location: 437-1783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 755-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 755-1394 bp Feature: domain Description: GIIM Note: maturase Location: 1472-1703 bp Feature: domain Description: GIIM Note: maturase Location: 1472 -1703 bp Feature: gene Location: 2746-3087 bp Feature: domain Description: Cah Location: 2848-3085 bp Feature: domain Description: Cah Location: 2 848-3085 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cah (COG3338), Arch_GlmM (TIGR03990), RVT-GII, GIIM (pfam08388)