myRT

myRT report for GCA_011371135.1_ASM1137113v1

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Seq: DRRU01000157.1 TPA_asm: Saprospiraceae bacterium isolate HyVt-613 HyVt-613_k295_179858, whole genome shotgun sequence (4191 bp)
Overview 1 RT 1: 3-3920 bp Neighborhood of RT #1 [3, 3931] CESA_like RVT-DGRs Fib_succ_major Avd_like Feature: gene Location: 3-182 bp Feature: gene Location: 634-1965 bp Feature: domain Description: CESA_like Location: 814-1432 bp Feature: domain Description: CESA_like Location: 81 4-1 432 bp Feature: gene Location: 1980-3179 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2202-2907 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2202-2907 bp Feature: gene Location: 3204-3443 bp Feature: domain Description: Fib_succ_major Location: 3222-3414 bp Feature: domain Description: Fib_succ_major Location: 3222-341 4 bp Feature: gene Location: 3587-3931 bp Feature: domain Description: Avd_like Location: 3614-3920 bp Feature: domain Description: Avd_like Location: 361 4-3920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), CESA_like (cd06423)

Seq: DRRU01000347.1 TPA_asm: Saprospiraceae bacterium isolate HyVt-613 HyVt-613_k295_275184, whole genome shotgun sequence (3922 bp)
Overview 1 RT 1: 2-3914 bp Neighborhood of RT #1 [2, 3919] pfam03781 HRDC RVT-DGRs LRR_1 RocCOR COR Feature: gene Location: 2-544 bp Feature: domain Description: pfam03781 Location: 5-533 bp Feature: domain Description: pfam03781 Location: 5-533 bp Feature: gene Location: 708-1163 bp Feature: domain Description: HRDC Location: 951-1140 bp Feature: domain Description: HRDC Location: 951-1140 bp Feature: gene Location: 1181-2161 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1370-1955 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1370-1955 bp Feature: gene Location: 2549-3919 bp Feature: domain Description: LRR_1 Location: 2594-2810 bp Feature: domain Description: LRR_1 Location: 2 594-2 810 bp Feature: domain Description: RocCOR Location: 3110-3527 bp Feature: domain Description: RocCOR Location: 3110-352 7 bp Feature: domain Description: COR Location: 3650-3914 bp Feature: domain Description: COR Location: 3650-3914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), HRDC (smart00341)

Seq: DRRU01000491.1 TPA_asm: Saprospiraceae bacterium isolate HyVt-613 HyVt-613_k295_86993, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 3-2420 bp Neighborhood of RT #1 [3, 2503] RVT-Retrons Cas1_I-II-III CRISPR_Cas2 Feature: gene Location: 3-1070 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 186-753 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 186-753 bp Feature: gene Location: 1201-2199 bp Feature: domain Description: Cas1_I-II-III Location: 1225-2188 bp Feature: domain Description: Cas1_I-II-III Location: 1225-2188 bp Feature: gene Location: 2201-2503 bp Feature: domain Description: CRISPR_Cas2 Location: 2204-2420 bp Feature: domain Description: CRISPR_Cas2 Location: 2204-2420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), CRISPR_Cas2 (pfam09827), RVT-Retrons