myRT

myRT report for GCA_011379065.1_ASM1137906v1

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Seq: JAAAEV010000002.1 Streptococcus agalactiae strain iGBS472 NODE_2_length_221857_cov_59.8738, whole genome shotgun sequence (221857 bp)
Overview 1 RT 1: 116451-119331 bp Neighborhood of RT #1 [116451, 119504] PRK07275 PRK07275 RVT-GII GIIM HTH_XRE Feature: gene Location: 116451-116867 bp Feature: domain Description: PRK07275 Location: 116454-116790 bp Feature: domain Description: PRK07275 Location: 1 1 6454-1 1 6790 bp Feature: domain Description: PRK07275 Location: 116817-116865 bp Feature: domain Description: PRK07275 Location: 1 1 681 7-1 1 6865 bp Feature: gene Location: 117018-117206 bp Feature: gene Location: 117448-118767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117748-118381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 7748-1 1 8381 bp Feature: domain Description: GIIM Note: maturase Location: 118450-118672 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 8450-1 1 8672 bp Feature: gene Location: 118900-119160 bp Feature: gene Location: 119157-119504 bp Feature: domain Description: HTH_XRE Location: 119169-119331 bp Feature: domain Description: HTH_XRE Location: 1 1 91 69-1 1 9331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07275 (single-stranded DNA-binding protein; Provisional), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530)

Seq: JAAAEV010000007.1 Streptococcus agalactiae strain iGBS472 NODE_7_length_103658_cov_52.9608, whole genome shotgun sequence (103658 bp)
Overview 1 RT 1: 57167-67336 bp Neighborhood of RT #1 [57167, 67336] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 57167-57466 bp Feature: gene Location: 57537-58880 bp Feature: domain Description: KOG1000 Location: 57816-58131 bp Feature: domain Description: KOG1000 Location: 57816-58131 bp Feature: gene Location: 59018-60805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59288-60080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592 88-60080 bp Feature: domain Description: Intron_maturas2 Location: 60185-60416 bp Feature: domain Description: Intron_maturas2 Location: 60185-60416 bp Feature: domain Description: HNHc Note: nucleases Location: 60581-60767 bp Feature: domain Description: HNHc Note: nucleases Location: 60581-60767 bp Feature: gene Location: 61294-66735 bp Feature: domain Description: N6_Mtase Location: 63286-63877 bp Feature: domain Description: N6_Mtase Location: 632 86-63877 bp Feature: domain Description: COG4646 Location: 64471-66592 bp Feature: domain Description: COG4646 Location: 64471-66592 bp Feature: gene Location: 66785-67336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )