myRT

myRT report for GCA_011379085.1_ASM1137908v1

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Seq: WUBW01000027.1 Escherichia coli strain SCNJ06 Scaffold27_1, whole genome shotgun sequence (51630 bp)
Overview 1 RT 1: 22226-26509 bp Neighborhood of RT #1 [22226, 26517] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 22226-23131 bp Feature: gene Location: 23269-23460 bp Feature: gene Location: 23617-24156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23947-24025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23947-24025 bp Feature: gene Location: 24184-24705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24190-24472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 90-24472 bp Feature: domain Description: GIIM Note: maturase Location: 24520-24700 bp Feature: domain Description: GIIM Note: maturase Location: 24520-24700 bp Feature: gene Location: 25027-25215 bp Feature: gene Location: 25255-26517 bp Feature: domain Description: YesM Location: 25768-26509 bp Feature: domain Description: YesM Location: 25768-26509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: WUBW01000006.1 Escherichia coli strain SCNJ06 Scaffold6_1, whole genome shotgun sequence (184410 bp)
Overview 1 RT 1: 1440-4910 bp Neighborhood of RT #1 [1440, 5017] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 1440-1742 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1449-1701 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1449-1701 bp Feature: gene Location: 1926-2171 bp Feature: gene Location: 2197-3129 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2299-2893 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 99-2 893 bp Feature: gene Location: 3131-4117 bp Feature: gene Location: 4745-5017 bp Feature: domain Description: PRK09678 Location: 4754-4910 bp Feature: domain Description: PRK09678 Location: 4754-4910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: WUBW01000073.1 Escherichia coli strain SCNJ06 Scaffold72_1, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)