myRT

myRT report for GCA_011379115.1_ASM1137911v1

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Seq: JAAAET010000002.1 Streptococcus agalactiae strain iGBS459 NODE_2_length_256818_cov_72.2887, whole genome shotgun sequence (256818 bp)
Overview 1 RT 1: 67296-77465 bp Neighborhood of RT #1 [67296, 77465] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 67296-67847 bp Feature: gene Location: 67897-73338 bp Feature: domain Description: N6_Mtase Location: 69889-70480 bp Feature: domain Description: N6_Mtase Location: 69889-70480 bp Feature: domain Description: COG4646 Location: 71071-73195 bp Feature: domain Description: COG4646 Location: 71 071 -731 95 bp Feature: gene Location: 73836-75614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74097-74889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74097-74889 bp Feature: domain Description: Intron_maturas2 Location: 74994-75225 bp Feature: domain Description: Intron_maturas2 Location: 74994-75225 bp Feature: domain Description: HNHc Note: nucleases Location: 75390-75576 bp Feature: domain Description: HNHc Note: nucleases Location: 75390-75576 bp Feature: gene Location: 75752-77095 bp Feature: domain Description: KOG1000 Location: 76031-76346 bp Feature: domain Description: KOG1 000 Location: 76031 -76346 bp Feature: gene Location: 77166-77465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: JAAAET010000032.1 Streptococcus agalactiae strain iGBS459 NODE_32_length_1863_cov_289.654, whole genome shotgun sequence (1863 bp)
Overview 1 RT 1: 67-1861 bp Neighborhood of RT #1 [67, 1861] RVT-GII GIIM Feature: gene Location: 67-1377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-919 bp Feature: domain Description: GIIM Note: maturase Location: 973-1189 bp Feature: domain Description: GIIM Note: maturase Location: 973-1189 bp Feature: gene Location: 1709-1861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)