myRT

myRT report for GCA_011379265.1_ASM1137926v1

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Seq: JAAAEM010000003.1 Streptococcus agalactiae strain iGBS430 NODE_3_length_176228_cov_49.6614, whole genome shotgun sequence (176228 bp)
Overview 1 RT 1: 125469-135638 bp Neighborhood of RT #1 [125469, 135638] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 125469-125768 bp Feature: gene Location: 125839-127182 bp Feature: domain Description: KOG1000 Location: 126118-126433 bp Feature: domain Description: KOG1 000 Location: 1 261 1 8-1 26433 bp Feature: gene Location: 127320-129107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127590-128382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 27590-1 28382 bp Feature: domain Description: Intron_maturas2 Location: 128487-128718 bp Feature: domain Description: Intron_maturas2 Location: 1 28487-1 2871 8 bp Feature: domain Description: HNHc Note: nucleases Location: 128883-129069 bp Feature: domain Description: HNHc Note: nucleases Location: 1 28883-1 29069 bp Feature: gene Location: 129596-135037 bp Feature: domain Description: N6_Mtase Location: 131588-132179 bp Feature: domain Description: N6_Mtase Location: 1 31 588-1 321 79 bp Feature: domain Description: COG4646 Location: 132770-134894 bp Feature: domain Description: COG4646 Location: 1 32770-1 34894 bp Feature: gene Location: 135087-135638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: JAAAEM010000037.1 Streptococcus agalactiae strain iGBS430 NODE_41_length_1863_cov_279.049, whole genome shotgun sequence (1863 bp)
Overview 1 RT 1: 67-1861 bp Neighborhood of RT #1 [67, 1861] RVT-GII GIIM Feature: gene Location: 67-1377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-919 bp Feature: domain Description: GIIM Note: maturase Location: 973-1189 bp Feature: domain Description: GIIM Note: maturase Location: 973-1189 bp Feature: gene Location: 1709-1861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)