myRT

myRT report for GCA_011379535.1_ASM1137953v1

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Seq: JAAACW010000025.1 Streptococcus dysgalactiae strain iSDSE348 NODE_25_length_31288_cov_64.1461, whole genome shotgun sequence (31288 bp)
Overview 1 RT 1: 10119-14053 bp Neighborhood of RT #1 [10119, 14340] SSB_OBF Maff2 RVT-GII HNHc YozG AcrR Feature: gene Location: 10119-10430 bp Feature: domain Description: SSB_OBF Location: 10206-10389 bp Feature: domain Description: SSB_OBF Location: 1 0206-1 0389 bp Feature: gene Location: 10434-10565 bp Feature: domain Description: Maff2 Location: 10437-10563 bp Feature: domain Description: Maff2 Location: 1 0437-1 0563 bp Feature: gene Location: 11288-13147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11609-12344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 609-1 2344 bp Feature: domain Description: HNHc Note: nucleases Location: 12875-13037 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2875-1 3037 bp Feature: gene Location: 13459-13686 bp Feature: domain Description: YozG Location: 13462-13672 bp Feature: domain Description: YozG Location: 1 3462-1 3672 bp Feature: gene Location: 13708-14340 bp Feature: domain Description: AcrR Location: 13750-14053 bp Feature: domain Description: AcrR Location: 1 3750-1 4053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSB_OBF (cd04496), Maff2 (pfam12750), RVT-GII, HNHc (smart00507), YozG (COG3655), AcrR (COG1309)

Seq: JAAACW010000040.1 Streptococcus dysgalactiae strain iSDSE348 NODE_40_length_18226_cov_46.4812, whole genome shotgun sequence (18226 bp)
Overview 1 RT 1: 1-10316 bp Neighborhood of RT #1 [1, 10342] PHA03411 COG4646 COG4646 COG4646 COG4646 Helicase_C RVT_N RVT-GII GIIM ssb Feature: gene Location: 1-4149 bp Feature: domain Description: PHA03411 Location: 2122-2389 bp Feature: domain Description: PHA03411 Location: 2 12 2 -2 389 bp Feature: domain Description: COG4646 Location: 2704-3457 bp Feature: domain Description: COG4646 Location: 2 704-3457 bp Feature: domain Description: COG4646 Location: 3565-3658 bp Feature: domain Description: COG4646 Location: 3565-3658 bp Feature: domain Description: COG4646 Location: 3727-4144 bp Feature: domain Description: COG4646 Location: 372 7-4144 bp Feature: gene Location: 4258-5931 bp Feature: domain Description: COG4646 Location: 4264-5437 bp Feature: domain Description: COG4646 Location: 42 64-5437 bp Feature: domain Description: Helicase_C Location: 5626-5845 bp Feature: domain Description: Helicase_C Location: 562 6-5845 bp Feature: gene Location: 6487-8157 bp Feature: RT Description: RVT_N Location: 6532-6775 bp Feature: RT Description: RVT_N Location: 6532 -6775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6820-7468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 682 0-7468 bp Feature: domain Description: GIIM Note: maturase Location: 7522-7753 bp Feature: domain Description: GIIM Note: maturase Location: 752 2 -7753 bp Feature: gene Location: 8291-9640 bp Feature: gene Location: 9683-10342 bp Feature: domain Description: ssb Location: 9929-10316 bp Feature: domain Description: ssb Location: 992 9-10316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA03411 (putative methyltransferase; Provisional), COG4646 (Adenine-specific DNA methylase, N12 class ), Helicase_C (pfam00271), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), ssb (TIGR00621)