myRT

myRT report for GCA_011379605.1_ASM1137960v1

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Seq: JAAACU010000001.1 Streptococcus dysgalactiae strain iSDSE324 NODE_1_length_229107_cov_49.1726, whole genome shotgun sequence (229107 bp)
Overview 1 RT 1: 154495-159020 bp 2 RT 2: 186861-198660 bp Neighborhood of RT #1 [154495, 159088] SSB_OBF Maff2 RVT-GII HNHc YozG N6_Mtase Neighborhood of RT #2 [186861, 198660] PHA03411 COG4646 COG4646 Helicase_C RVT_N RVT-GII GIIM Feature: gene Location: 154495-154806 bp Feature: domain Description: SSB_OBF Location: 154579-154765 bp Feature: domain Description: SSB_OBF Location: 1 54579-1 54765 bp Feature: gene Location: 154810-154941 bp Feature: domain Description: Maff2 Location: 154813-154939 bp Feature: domain Description: Maff2 Location: 1 5481 3-1 54939 bp Feature: gene Location: 155657-157525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155984-156722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 55984-1 56722 bp Feature: domain Description: HNHc Note: nucleases Location: 157253-157415 bp Feature: domain Description: HNHc Note: nucleases Location: 1 57253-1 5741 5 bp Feature: gene Location: 157838-158056 bp Feature: domain Description: YozG Location: 157841-158051 bp Feature: domain Description: YozG Location: 1 57841 -1 58051 bp Feature: gene Location: 158060-159088 bp Feature: domain Description: N6_Mtase Location: 158849-159020 bp Feature: domain Description: N6_Mtase Location: 1 58849-1 59020 bp Feature: gene Location: 186861-194249 bp Feature: domain Description: PHA03411 Location: 190461-190707 bp Feature: domain Description: PHA0341 1 Location: 1 90461 -1 90707 bp Feature: domain Description: COG4646 Location: 191022-191775 bp Feature: domain Description: COG4646 Location: 1 91 022-1 91 775 bp Feature: domain Description: COG4646 Location: 192045-193755 bp Feature: domain Description: COG4646 Location: 1 92045-1 93755 bp Feature: domain Description: Helicase_C Location: 193944-194163 bp Feature: domain Description: Helicase_C Location: 1 93944-1 941 63 bp Feature: gene Location: 194598-194735 bp Feature: gene Location: 194805-196475 bp Feature: RT Description: RVT_N Location: 194850-195093 bp Feature: RT Description: RVT_N Location: 1 94850-1 95093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195138-195786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 951 38-1 95786 bp Feature: domain Description: GIIM Note: maturase Location: 195840-196071 bp Feature: domain Description: GIIM Note: maturase Location: 1 95840-1 96071 bp Feature: gene Location: 196609-197958 bp Feature: gene Location: 197983-198660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSB_OBF (cd04496), Maff2 (pfam12750), RVT-GII, HNHc (smart00507), YozG (COG3655), N6_Mtase (pfam02384), PHA03411 (putative methyltransferase; Provisional), COG4646 (Adenine-specific DNA methylase, N12 class ), Helicase_C (pfam00271), RVT_N (pfam13655)
GIIM (pfam08388)