myRT

myRT report for GCA_011379725.1_ASM1137972v1

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Seq: JAAACN010000001.1 Streptococcus dysgalactiae strain iSDSE222 NODE_1_length_247261_cov_41.7004, whole genome shotgun sequence (247261 bp)
Overview 1 RT 1: 174068-177983 bp 2 RT 2: 224915-231171 bp Neighborhood of RT #1 [174068, 178594] SSB_OBF Maff2 RVT-GII HNHc HTH_XRE Neighborhood of RT #2 [224915, 231305] SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 RVT_N RVT-GII GIIM SSB_OBF Feature: gene Location: 174068-174379 bp Feature: domain Description: SSB_OBF Location: 174152-174338 bp Feature: domain Description: SSB_OBF Location: 1 741 52-1 74338 bp Feature: gene Location: 174383-174514 bp Feature: domain Description: Maff2 Location: 174386-174512 bp Feature: domain Description: Maff2 Location: 1 74386-1 7451 2 bp Feature: gene Location: 175236-177119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175569-176307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 75569-1 76307 bp Feature: domain Description: HNHc Note: nucleases Location: 176853-177003 bp Feature: domain Description: HNHc Note: nucleases Location: 1 76853-1 77003 bp Feature: gene Location: 177389-177706 bp Feature: gene Location: 177785-178594 bp Feature: domain Description: HTH_XRE Location: 177812-177983 bp Feature: domain Description: HTH_XRE Location: 1 7781 2-1 77983 bp Feature: gene Location: 224915-226801 bp Feature: domain Description: SR_TndX_transposase Location: 224957-225371 bp Feature: domain Description: SR_TndX_transposase Location: 224957-225371 bp Feature: domain Description: Recombinase Location: 225476-225851 bp Feature: domain Description: Recombinase Location: 225476-225851 bp Feature: domain Description: Zn_ribbon_recom Location: 225890-226082 bp Feature: domain Description: Zn_ribbon_recom Location: 225890-226082 bp Feature: domain Description: DUF4368 Location: 226358-226553 bp Feature: domain Description: DUF4368 Location: 226358-226553 bp Feature: gene Location: 227245-227382 bp Feature: gene Location: 227452-229122 bp Feature: RT Description: RVT_N Location: 227497-227740 bp Feature: RT Description: RVT_N Location: 227497-227740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227785-228433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227785-228433 bp Feature: domain Description: GIIM Note: maturase Location: 228487-228718 bp Feature: domain Description: GIIM Note: maturase Location: 228487-22871 8 bp Feature: gene Location: 229256-230605 bp Feature: gene Location: 230646-231305 bp Feature: domain Description: SSB_OBF Location: 230901-231171 bp Feature: domain Description: SSB_OBF Location: 230901 -231 1 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSB_OBF (cd04496), Maff2 (pfam12750), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287), RVT_N (pfam13655)
GIIM (pfam08388)