myRT

myRT report for GCA_011389735.1_ASM1138973v1

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Seq: JAABTS010000143.1 Desulfobacteraceae bacterium isolate S24.Bin080 Scaffold_139, whole genome shotgun sequence (15412 bp)
Overview 1 RT 1: 2543-4996 bp Neighborhood of RT #1 [2543, 4996] CRISPR_Cas2 Cas2_I_II_III RVT-CRISPR Feature: gene Location: 2543-2920 bp Feature: domain Description: CRISPR_Cas2 Location: 2561-2753 bp Feature: domain Description: CRISPR_Cas2 Location: 2561 -2753 bp Feature: gene Location: 2939-3217 bp Feature: domain Description: Cas2_I_II_III Location: 2957-3155 bp Feature: domain Description: Cas2_I_II_III Location: 2957-31 55 bp Feature: gene Location: 3242-4093 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3461-4061 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3461 -4061 bp Feature: gene Location: 4097-4666 bp Feature: gene Location: 4676-4996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas2 (pfam09827), Cas2_I_II_III (cl11442), RVT-CRISPR

Seq: JAABTS010000230.1 Desulfobacteraceae bacterium isolate S24.Bin080 Scaffold_225, whole genome shotgun sequence (8193 bp)
Overview 1 RT 1: 5830-7541 bp Neighborhood of RT #1 [5830, 7750] RVT-DGRs Feature: gene Location: 5830-6015 bp Feature: gene Location: 6144-6383 bp Feature: gene Location: 6743-7750 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6953-7541 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6953-7541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JAABTS010000308.1 Desulfobacteraceae bacterium isolate S24.Bin080 Scaffold_301, whole genome shotgun sequence (5502 bp)
Overview 1 RT 1: 82-1104 bp Neighborhood of RT #1 [82, 1104] RVT-CRISPR-like Feature: gene Location: 82-591 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 100-244 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 100-244 bp Feature: gene Location: 670-825 bp Feature: gene Location: 889-1104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: JAABTS010000317.1 Desulfobacteraceae bacterium isolate S24.Bin080 Scaffold_310, whole genome shotgun sequence (5166 bp)
Overview 1 RT 1: 3-5130 bp Neighborhood of RT #1 [3, 5165] YfmG RVT-DGRs HRDC COG5635 YfmG Feature: gene Location: 3-518 bp Feature: gene Location: 591-743 bp Feature: domain Description: YfmG Location: 597-705 bp Feature: domain Description: YfmG Location: 597-705 bp Feature: gene Location: 756-1628 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 831-1425 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 831-14 25 bp Feature: gene Location: 1757-2251 bp Feature: domain Description: HRDC Location: 2006-2204 bp Feature: domain Description: HRDC Location: 2006-2204 bp Feature: gene Location: 2508-5165 bp Feature: domain Description: COG5635 Location: 2895-4101 bp Feature: domain Description: COG5635 Location: 2895-4 101 bp Feature: domain Description: YfmG Location: 4437-5130 bp Feature: domain Description: YfmG Location: 4 4 37-5130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, HRDC (smart00341), COG5635 (Predicted NTPase, NACHT family domain )

Seq: JAABTS010000341.1 Desulfobacteraceae bacterium isolate S24.Bin080 Scaffold_334, whole genome shotgun sequence (4572 bp)
Overview 1 RT 1: 2178-4088 bp Neighborhood of RT #1 [2178, 4228] Unstab_antitox RVT-DGRs Hrd Feature: gene Location: 2178-2375 bp Feature: gene Location: 2474-2692 bp Feature: domain Description: Unstab_antitox Location: 2519-2672 bp Feature: domain Description: Unstab_antitox Location: 25 19-2672 bp Feature: gene Location: 2722-3729 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2932-3520 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2932-35 20 bp Feature: gene Location: 3638-4228 bp Feature: domain Description: Hrd Location: 3896-4088 bp Feature: domain Description: Hrd Location: 3896-4088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Unstab_antitox (pfam09720), RVT-DGRs, Hrd (LOAD_Hrd)

Seq: JAABTS010000409.1 Desulfobacteraceae bacterium isolate S24.Bin080 Scaffold_401, whole genome shotgun sequence (3218 bp)
Overview 1 RT 1: 349-2728 bp Neighborhood of RT #1 [349, 2728] PRK09974 Toxin_YhaV RVT-GII DUF433 Feature: gene Location: 349-678 bp Feature: domain Description: PRK09974 Location: 367-676 bp Feature: domain Description: PRK09974 Location: 36 7-6 76 bp Feature: gene Location: 681-1175 bp Feature: domain Description: Toxin_YhaV Location: 723-1131 bp Feature: domain Description: Toxin_YhaV Location: 723-1131 bp Feature: gene Location: 1398-1928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1599-1845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1599-1845 bp Feature: gene Location: 2097-2348 bp Feature: domain Description: DUF433 Location: 2127-2286 bp Feature: domain Description: DUF433 Location: 2127-2286 bp Feature: gene Location: 2345-2728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09974 (type II toxin-antitoxin system PrlF family antitoxin), Toxin_YhaV (pfam11663), RVT-GII, DUF433 (pfam04255)

Seq: JAABTS010000444.1 Desulfobacteraceae bacterium isolate S24.Bin080 Scaffold_437, whole genome shotgun sequence (2664 bp)
Overview 1 RT 1: 3-2481 bp Neighborhood of RT #1 [3, 2540] DUF1566 Avd_like DUF1566 RVT-DGRs MutS_I Feature: gene Location: 3-347 bp Feature: domain Description: DUF1566 Location: 57-330 bp Feature: domain Description: DUF1566 Location: 57 -330 bp Feature: gene Location: 409-795 bp Feature: domain Description: Avd_like Location: 436-745 bp Feature: domain Description: Avd_like Location: 436-7 45 bp Feature: gene Location: 732-2540 bp Feature: domain Description: DUF1566 Location: 930-1053 bp Feature: domain Description: DUF1566 Location: 930-1053 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1248-1929 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1248-1929 bp Feature: domain Description: MutS_I Location: 2259-2481 bp Feature: domain Description: MutS_I Location: 2259-2481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, MutS_I (pfam01624)

Seq: JAABTS010000085.1 Desulfobacteraceae bacterium isolate S24.Bin080 Scaffold_80, whole genome shotgun sequence (23785 bp)
Overview 1 RT 1: 40-4860 bp Neighborhood of RT #1 [40, 4860] COG5635 YfmG RVT-DGRs HRDC Feature: gene Location: 40-2904 bp Feature: domain Description: COG5635 Location: 649-1756 bp Feature: domain Description: COG5635 Location: 649-1756 bp Feature: domain Description: YfmG Location: 2152-2890 bp Feature: domain Description: YfmG Location: 2152-28 90 bp Feature: gene Location: 3205-4206 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3415-4000 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3415-4000 bp Feature: gene Location: 4193-4690 bp Feature: domain Description: HRDC Location: 4433-4631 bp Feature: domain Description: HRDC Location: 4433-4631 bp Feature: gene Location: 4723-4860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), YfmG (COG1262), RVT-DGRs, HRDC (smart00341)